Pseudomonas umsongensis: HGP31_01710
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Entry
HGP31_01710 CDS
T06842
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00521
Streptomycin biosynthesis
pum00523
Polyketide sugar unit biosynthesis
pum00541
Biosynthesis of various nucleotide sugars
pum01100
Metabolic pathways
pum01110
Biosynthesis of secondary metabolites
pum01250
Biosynthesis of nucleotide sugars
Module
pum_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HGP31_01710 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HGP31_01710 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HGP31_01710 (rfbC)
Enzymes [BR:
pum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HGP31_01710 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QJC77063
UniProt:
A0AAE6ZR40
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Position
complement(384182..384727)
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AA seq
181 aa
AA seq
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MNVVTTDLPGVLIIEPKVFGDDRGFFYESFNAKVFKEATGLSTQFIQDNHSRSQKGVLRG
LHYQLENTQDKLVRVCAGEILDVAVDVRRSSPHFGQWVAVRLSAQNNRQLWIPKGFAHGF
LVLSEFAEVLYKTTEYYNPSAERSIRWDDPDLAIDWPLDTAPQLSARDQAAAFFKDADVF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtgaccaccgacctgcccggtgttttgatcatcgagcccaaggttttcggt
gacgatcgtggttttttctacgaaagtttcaatgcgaaggttttcaaggaagccactggc
ctgagcactcaattcattcaggacaaccattcgcgctcgcaaaaaggcgtgctgcgcggg
ctgcattaccaacttgagaatacccaggacaaactggttcgggtctgtgccggggaaatc
cttgatgtggctgttgatgtgcggcgcagctcgccacatttcggccagtgggtagccgtg
cgtctttctgcgcagaacaatcgccaactgtggattcccaagggtttcgcccacggtttc
ctggtgttgagtgagttcgccgaggttttgtacaaaaccactgagtactacaacccatcg
gccgaacgcagcattcgctgggacgaccccgacctggccatcgactggccgctcgatact
gcgccgcaactgtcggccagggaccaggccgcggcatttttcaaggacgccgacgtcttc
gactga
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