Pseudomonas umsongensis: HGP31_03705
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Entry
HGP31_03705 CDS
T06842
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HGP31_03705 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_03705 (recC)
Enzymes [BR:
pum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HGP31_03705 (recC)
DNA repair and recombination proteins [BR:
pum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HGP31_03705 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
QJC77438
UniProt:
A0AAE6ZRV4
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All DBs
Position
850640..854092
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AA seq
1150 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPAKSLLDKAPLTWRLMRLLPQL
INQPHFEPLQRFLTHDPDLRKRYQLAERLADLFDQYQVYRADWLEDWAQGRHQLRNGRGE
AKLLTAANAWQAELWRALLLDVGEEGMAQSRAGVHQRFIERINSLDVAPSGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKSGMPGVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSAFRDGRIDLFSESQPLHMLNQL
QDDILELRPLGETREYWPAVELQKDSSIRFHIAHSAQREVEILHDQLLARFSADPLLRPR
DVIVMVPDIDAYAPHIRAVFGQLERHDPRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFGVEERDLPTLHRWIEGAGIRWGMNAEQRAGLGLPEALEQNS
WRFGLRRMLLGYAVGSSGACGGIEPYDEIGGLDAALIGPLVALLDALEIAHHELSQPASP
QQWSQRLQALVALFFQASNEHDEYLLTQLETLRETWLENCESVGLHDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLAD
AEEGLLEAMTQEHPLQPFSARYFHQGDALFSYASEWQVLHQAGGHAPGHEMLDAHIQEEP
LSLGQLQDFLRNPVRHFFSQRLKVFFEAAEAPLADEEPFVLDALQRYGLSDSLLGAALAD
LENTEQVLEAQASRLQNSGLLPMAGFGECLQRELIEPLPDLLARYQQLLALWPTPLSSAL
PVNLQVDDLRIEGWLSGLHQRADGGLLAVTTIPNSIGSIKTRKWHRLTRPWVNHLVACAS
GMPMTTALVASDDSLLLDPIAQESALGTLGDLLLAWQSGMRQPLPIAVKTAFAWLGQTDP
AKAQAAARKAYEGDGLTTDGERRESMALARQFADYDALVADETFVDWCDALYRPLLEAPW
RSVSSEEARP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcaacgtccctcagtgctggttttatggtggttcacggcaatcgcctggac
gagttacgcagcctggtggtgagctggatgcggcgctacccgctggcccccctggaaaat
gaaatcgccctggtgcagagcaacggcatcgcgcaatggcttaagctggcactcgccgaa
gatcctgaagacgacgacatgggcggctgcgggatcgccgccgccatcgatgtgcaattg
cccggcagtttcatgtggcagctctaccggatggtcctgggtcgcgacgagatcccggcc
aagtcgctgctggataaagcccccctgacctggcgcctgatgcgtctgctgccgcagttg
atcaatcagccacacttcgagccgctccagcgttttctcacgcatgaccccgatttgcgc
aaacgctatcaactggctgagcgactggcggatctgttcgaccagtaccaggtgtaccgc
gccgattggctcgaagactgggcgcaaggtcgtcaccagttacgtaacggcaggggcgaa
gccaagctgctgactgctgccaatgcctggcaggcagagttgtggcgtgcactgttgctg
gatgtcggtgaagaaggaatggcgcaaagccgggccggcgtgcatcagcggtttatcgaa
cgcatcaacagcctcgacgtggctccgagtggattaccgtcacgggtcatcgtattcggc
atttcctcgttgcccgctcaagccctcgaggccctggccggactggctcggttcagccag
gtgctgctgtgcgtgcacaacccctgtcgtcaccattgggcagacatcgtcgccgacaaa
gacctgttgcgtcatcaatacaaacggcaggcgcgcaaaagtggcatgccgggcgttctc
gatccgcaaaccctgcatcaacacgcgcatcccttactggctgcatggggcaagcaggga
cgggactacatcaacctgctcgacagctacgatgatcccaacagctatcgctcggcgttt
cgtgacgggcgcatcgacctgttcagtgaaagccaaccgctgcatatgctcaaccagttg
caagacgacatccttgagttgcgtccattgggcgaaacccgtgaatactggccagccgtg
gaactgcagaaagactcgtcgatccgcttccacattgcccacagcgcccagcgcgaagtg
gagatcctgcacgatcagttgctcgcacgcttcagcgccgatccgcttttacgtccccgg
gatgtgattgtcatggtcccggacatcgacgcctatgccccgcatattcgcgcggtgttc
ggtcagcttgagcgtcacgacccgcgcttcatacccttcaccctcgcggaccaagggcag
cgcggccgtgacccgctgttgatcgcggtggagcatctgctcaagttgccagacagccgt
ttcccggtcagcgagattctcgacctgctggacgtcccggcgctacgggagcgcttcggc
gtggaggaacgtgacctgccgaccctgcatcgctggatcgaaggcgcgggtatccgctgg
gggatgaacgccgagcagcgcgcaggcctgggcctgcccgaggcattggagcaaaacagt
tggcgttttggcttgcggcgcatgttgctcgggtatgccgttggcagttccggtgcctgt
ggcggcatcgaaccctacgacgagatcggtggtctggatgccgcgctcataggcccgctg
gttgcgctactggacgcactggaaattgcccaccacgagctctctcaaccggcatcgccg
cagcaatggagccagcgcttgcaggcattggtggcactgttcttccaggccagtaatgag
cacgacgagtatttgttgacgcagctggaaacgttacgcgaaacctggctggaaaactgt
gagtcagttggcttgcacgacgaactaccgctgaccgtcgtccgtgaagcctggttggcc
ggtctcgatcagggtcgattgtcccagcgttttctggctggagcggtcaacttctgtacc
ttgatgcccatgcgcgcgattccgttcaaactggtgtgcctgctggggatgaacgatggt
gattacccgcgggcacagccgccactggacttcgacctcatgggcagcgactaccggcct
ggcgatcgctcgcggcgtgaggacgaccgctatttgctgctggaggcattgttgtcggcg
cgcgatcaactctacataagctgggtcggtcgcagcattcgcgataacagcgagcgcccg
gcatccgtgctgatcggccagctccgtgaccacctggccagcggttggcgattggccgat
gccgaggaaggcttgcttgaggccatgacccaggagcatccgctgcaacccttcagtgcc
cgttacttccaccagggtgatgccctgttcagctatgccagcgagtggcaggtgcttcac
caggccggtgggcatgcgcctggccatgagatgctcgatgcccacatccaggaggaaccg
ctgagtcttgggcaactgcaggatttcttgcgcaacccggtgcgacatttcttcagtcag
cgattgaaggtgttctttgaagctgcagaagcgcctttggccgatgaagaaccctttgtc
ctcgatgccttgcaacgctatggcctgagcgacagtttgctcggcgcggcgttggcagac
ctggaaaataccgagcaggtgctggaggcgcaggccagtcgcctgcaaaacagtgggctg
ctgcccatggcaggatttggcgaatgcctgcaacgtgagttgatcgaacccttgccggat
ctgcttgcgcgttatcaacagctcctggcgttatggccaacacccctgagcagtgccctg
ccagtcaatctgcaagtggacgacctgcgtatcgagggctggctcagtggcctgcatcaa
cgggcagacgggggcttgctggcagtcacgacgatccccaacagcattggttcgatcaag
acccgcaagtggcatcggctgacacgaccgtgggtcaatcatctggtggcgtgcgccagc
ggcatgccgatgaccacggccttggtcgccagtgatgacagcctgctactcgacccgatt
gcacaggagagtgccttgggaaccctgggtgatctgttactggcctggcaatccggaatg
cgccaacccctgccgatagcggtcaagaccgcctttgcatggctcgggcagaccgacccg
gccaaagcccaggcagcggcccgcaaggcctatgagggggacggcttgaccactgacggc
gagcgccgcgaaagcatggcgctggcccgtcagttcgccgattacgacgccctggtcgcc
gacgagacattcgtcgattggtgcgatgccttgtatcgaccactgctcgaggccccttgg
cgctcagtgtccagtgaggaagctcgcccatga
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