Pseudomonas umsongensis: HGP31_03710
Help
Entry
HGP31_03710 CDS
T06842
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HGP31_03710 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_03710 (recB)
Enzymes [BR:
pum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HGP31_03710 (recB)
DNA repair and recombination proteins [BR:
pum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HGP31_03710 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_11
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QJC77439
UniProt:
A0AAE6ZSK9
LinkDB
All DBs
Position
854089..857796
Genome browser
AA seq
1235 aa
AA seq
DB search
MTTQTPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGESSDGQHTGFGRELLP
PQILVVTFTDAATKELRERIRTRLAEAARFFRDETPAPDALINQLRQEYAPEQWPGCANR
LDIAAQWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCY
PMQGDALNWVRSNWGGPAALLPRIRGLFASARDTLAGKEPAQLITECLQERRAALLELKM
PWRQWADELLALCHEGVASKSVDGRKMQARYFEPWFEKIKAWAEDESLEQLDIGTGFTRL
TPEGMAEAWKKGVAPDHPGLDAMPALKACLDGLPTPDAAVLQHAAHWVGARFEEEKRRRA
EMGFDDMLLRLDAALQSDGGERLASLIREQFPVALIDEFQDTDPVQYRIFESIYRIEDNS
PDSGLFLIGDPKQAIYAFRGADIYTYLRARQATTGRLHTLGTNFRSSHGMVSAVNHVFDY
AESRESGRGAFLFRENNGDNPVPFQPVESQGRKEVLRIDHQAVPALNIWHLCAEQPLSGV
VYRQQLAAACASEITALLNGGQQGVAGFVRDDQPLRGLMPADIAILVRDGKEAQAVRTEL
ANRGVRSVYLSDKDSVFAAQEAHDVLTWLKACAEPDVERPLRAALASITLNLSLVELEQL
NQDELAWEARVMQFRRYREIWRKQGVLPMLRRLLHDFKLPQALIARSDGERVLTNLLHLS
ELLQQAAAELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPL
VFLPFICSAKPVDGSRLPLHYHDAAGKAQVTLNPTAELIALADDERLAEDLRLLYVALTR
AQHACWLGVADLKRGNNNSSVLHLSALGYLLGGGACLNESAGLQAWLRDLQQGCPAIGLE
QMPEATREHYHPPQNTAALLAPLTVQRKASENWWIASYSALRIGDSLSIGSDQAPESAQA
QKLFDDERLDPHTPREMVAGGADIHRFPRGPNPGTFLHGLLEWAGNEGFAVTGQAVEDAI
ARRCNRRGWEGWISTLSEWLQHLLKSPLPLGSGEAPVVFGQLTQYRVEMEFWFASHKVDV
LKLDALVCQYTHNGVPRVAAESVLLNGMFKGFIDLTFEHDGRYYVADYKSNWLGVDDAAY
TAQAMEQSILDNRYDLQYVLYLLALHRQLKARLADYDYDRHVGGALYLFLRGTRAPSQGV
YFARPPKVLIEQLDRLFQGKPQPRVEPAWEQGELL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagacacccttggccctggcgttcccgctgcgaggcagtcaactgatcgaa
gccagcgccgggaccggcaagacctttaccatttccgcactctacctgcgcctggttctg
ggtcacggtggcgaatccagcgatggacagcacacgggtttcggtcgtgaactgctgccg
ccacagatcctcgtggtgaccttcaccgatgccgccaccaaagagctgcgcgaacgcatc
cgtacgcgactggcagaagccgcacggtttttccgcgacgaaacgccggcccccgacgca
ctgatcaaccagctgcggcaagagtacgcgccggaacagtggcccggctgcgccaaccgc
ctggacatcgccgcgcaatggatggatgaggcggccgtgtcgaccatccacagttggtgc
cagcgcatgttgcgcgagcacgctttcgacagcggtagcctgttcactcagactttggaa
accgaccacagcgatctgctgggggaagtgctgcgcgattactggcgcttgttctgctat
ccgatgcagggcgatgcattgaattgggtgcgcagcaattggggcggtccggcggccttg
ttgccgcgaatccgcgggctgttcgccagcgcgcgggacaccctcgccggtaaggagccg
gcgcaattgatcaccgagtgcctgcaggagcggcgagccgccttgcttgagctgaagatg
ccgtggcgccagtgggccgacgagttgctggccctgtgtcacgaaggtgtcgccagcaag
agtgtcgacgggcgcaagatgcaggcgcggtacttcgaaccctggttcgagaaaatcaaa
gcctgggccgaagacgagtccctcgagcaactggacatcggcaccggcttcacgcgcctg
acgcctgagggtatggcagaagcctggaagaaaggcgtcgcgccggatcatccaggcctg
gacgcgatgcccgcgctcaaggcctgtcttgatggcttgccgacgcccgatgcggccgta
ctgcaacacgctgcccattgggtgggggcgcgtttcgaagaggaaaagcgccgtcgtgcg
gaaatgggcttcgacgacatgttgctgcgcctggacgcggcgctgcaaagcgatggtggc
gagcgactggcgagcttgatccgcgaacagttcccggtggcattgatcgatgaattccag
gacaccgacccggtgcagtaccggatcttcgagagcatctaccgcattgaagacaacagc
cccgacagcgggctgttcctgatcggcgacccgaagcaggcgatctacgccttccgcggc
gccgacatctatacctacttgcgggcccgccaggcgaccacaggccgcctgcataccctg
ggcaccaacttccgttcgagccatggcatggtcagtgccgtgaaccatgtgttcgactat
gccgagtctcgcgagtccgggcgcggggcgttcctgttccgggagaacaatggcgataac
ccggtgcccttccagcctgtcgagtcccaggggcgcaaggaagtcctgcgcatcgatcat
caggcagtaccggcattgaacatctggcacctgtgcgccgagcagccgttgtccggtgtg
gtctatcgccaacaactggccgccgcctgtgccagcgaaatcaccgccttgctcaacggc
ggacaacaaggcgttgcgggcttcgtgcgcgatgaccagccgctcagaggcttgatgcct
gcggacattgccatcctcgtgcgtgatggcaaggaagcgcaggcggtgcgtaccgagctc
gctaaccgaggcgtgcgcagcgtttatctgtcggacaaggattcggtgttcgccgcgcag
gaagcccatgacgtgctaacctggctcaaggcctgcgccgagccggacgtcgagcggcca
ctgcgcgcggcactggccagcatcacgctgaatctgtcgttggtcgagcttgagcaattg
aaccaggacgaactggcctgggaagcgcgggtcatgcagtttcgccgctatcgcgagatt
tggcgaaagcagggcgtgttgccaatgctgcgacgcttgctgcatgacttcaagctgccc
caggcattgatagcgcgcagcgatggcgagcgggtcctgaccaacctgctgcacctgtcc
gagttgctgcaacaggcggccgccgaacttgatggcgagcaggcattgatccggcatttg
tccgagcacctggcattgtcgggccaggcgggtgaagagcagatcctgcgtctggaaagc
gacgagcaactggtcaaggtcgtgaccatccacaagtccaaggggctggagtacccgttg
gtgttcctgccgttcatttgctcggcgaaaccggtggatggcagccgtctgccgttgcat
taccacgacgccgcaggcaaggcccaagtgacgttgaaccccacggccgaattgatcgcc
ctggccgatgatgagcgcctggccgaagacctgcgcctgttgtatgtggcgctgacccgg
gcgcaacatgcctgctggctgggcgtggcggatctcaagcgcggcaataacaacagctcg
gtgctgcacctgtcggcgctcgggtatctgttgggtggcggtgcttgcttgaacgagtcg
gcgggcttgcaggcctggttgcgagaccttcaacagggctgtccggcgattggtcttgaa
caaatgcctgaagccacccgcgagcactaccatccaccgcagaacaccgctgcgttgctg
gcaccgttgaccgtgcaacgcaaggccagtgaaaactggtggattgcttcttacagcgcc
ttgcgcatcggcgacagcctgagtatcggcagtgatcaggcgcccgaaagtgcacaggca
cagaaactcttcgacgacgaacgtctcgacccgcatacccctcgagagatggtggccggc
ggtgccgatatccatcgattcccccgtggcccgaacccgggcacctttctccatgggttg
ctcgaatgggcaggcaacgaaggttttgccgtcaccgggcaagccgtggaagatgcgatt
gcccgtcgctgcaatcgccgtggctgggaaggctggatcagcacgctgagtgaatggctg
cagcatctgctcaagtcgccgttgccgctgggcagcggcgaggcaccggtggtattcggg
cagttgacccagtaccgtgtcgaaatggagttctggttcgccagccacaaggtcgatgtg
ctcaagctcgatgcgctggtgtgtcaatacacccacaacggtgtgcctcgggtggccgcc
gaatcggtgttgctcaacggcatgttcaagggcttcatcgacctgacgttcgagcatgac
ggccgctattacgtcgccgactacaaatccaactggctcggcgtcgacgacgcggcctat
accgcgcaggccatggagcagtcgattctcgacaaccgctacgacctgcaatacgtgttg
tacctgctggccctgcaccgccagctcaaggcccggcttgccgattacgattacgaccgg
catgtcggaggcgcgctgtacctgttcctgcgcggtacccgtgcgccaagccagggcgtg
tattttgcccgcccacccaaggtgctgatcgagcaactggaccgcctgtttcagggcaag
ccgcagcccagggtcgaacccgcctgggaacagggagaactgctatga
DBGET
integrated database retrieval system
