Pseudomonas umsongensis: HGP31_05870
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Entry
HGP31_05870 CDS
T06842
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00300
Lysine biosynthesis
pum01100
Metabolic pathways
pum01120
Microbial metabolism in diverse environments
pum01230
Biosynthesis of amino acids
Module
pum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HGP31_05870 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pum01002
]
HGP31_05870 (dapE)
Enzymes [BR:
pum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HGP31_05870 (dapE)
Peptidases and inhibitors [BR:
pum01002
]
Metallo peptidases
Family M20
HGP31_05870 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QJC77848
UniProt:
A0AAE7DCZ1
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All DBs
Position
complement(1318901..1320052)
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AA seq
383 aa
AA seq
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MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFMLEPMRIEDVDNFWATH
GKHDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPDHKGKVAFLITSDEEGPAHHGTKAVIERLVARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHALDWHIDWALSGLP
FLTEPGALLDAVSSSIKDITGRETQASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgacccttcaactcgccatcgacctgatccgccgt
ccgtccgtgacgccggtcgacgccgattgccagaagcagatgatgcagcgcctgggcgat
gccggtttcatgctggaaccgatgcgcatcgaagatgtggataacttctgggccacccac
ggcaaacacgacggcccggtactctgcttcgccggtcacaccgacgtggtgccgacaggt
cccgtgaccgcctggcaaatcgatccgttcaacgcagtcatcgacgaacacggcatgctc
tgcggccgtggcgcggcagacatgaaaggcagcctggcatccatgaccgtggccgccgag
cgtttcgtcgccgattacccggatcacaagggcaaggtcgccttcctgatcaccagcgac
gaagaaggcccggcgcaccatggcaccaaggccgtgattgaacgcctggtcgcacgcaag
gagcgcctggactggtgcatcgtcggcgaaccgtcgagcaccaccctggtcggtgacgtg
gtcaagaacggccgtcgcggttccctcggcgccaagctgaccgtgcgtggtgtacagggc
cacgtggcctacccgcacctggccaagaacccgatccacttggccgctccagcgctggcg
gaacttgccgccgagcattgggaccacggcaacgatttcttcccgccgaccagtttccag
atttccaacgtcaactccggcaccggcgcgaccaacgtcatcccgggtgacctggtcgcc
gtattcaacttccgcttctccaccgagtcgaccgtcgaaggcctgcaaaagcgtgtcgcc
gacattctcgacaagcatgccctggactggcacatcgactgggcactgtccggcctgccg
ttcctcaccgaaccgggcgcgctgctcgacgccgtgtcctcgagcatcaaggacatcacc
ggtcgtgaaacccaggcttccaccagcggtggcacttccgacggccgtttcattgcgacc
atgggcacgcaagtggtcgagttggggccggtcaacgcgaccatccaccaggtcaacgag
cgcgtgctggcggccgacctcgatgtgttgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
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