Pseudomonas umsongensis: HGP31_06065
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Entry
HGP31_06065 CDS
T06842
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pum03016
]
HGP31_06065 (truD)
Enzymes [BR:
pum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HGP31_06065 (truD)
Transfer RNA biogenesis [BR:
pum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HGP31_06065 (truD)
Prokaryotic type
HGP31_06065 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
LacI
E3_binding
Motif
Other DBs
NCBI-ProteinID:
QJC77885
UniProt:
A0AAE6ZRC8
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All DBs
Position
1364878..1365936
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGEPLGSAVLKAIAEDFQVDEVLDIPLSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVSLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLRILKTSRHKR
KLQRGAHSANGFTLRLTQFAGDKAAIEERLQLIAKQGIPNYFGAQRFGHDGGNVVDARAW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQQAQVGDLLAFTDSRSFFAAGE
AECSDPRLAILDLHPTGPQWGEGDSPALGAVHELEQAIAAREVELRDWLVNAGMSHERRI
LRLPIAGLTWHYPSPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaattgctcggcccgcgggcctatggggaaccgctcggcagcgccgta
ctgaaagccatcgcggaagatttccaggtcgatgaagtccttgatattcccttgagcggt
gatggcgaacacctgtggatctgggtggaaaaacgcggcctgaatactgaagaggcggca
cgtcgaatcgccaaggcagccggggtgtcattgcgcaccgtcagctacgccggactcaag
gatcgccaggcgctgacacgccagtggttcagcgtgcaactgccgggcaaggccgatccg
gatctgtccgcggcagaaaacgacacgcttagaatcctcaagaccagccggcataaacgc
aagctgcaacgcggtgcccactcggccaacggcttcaccttgcgcctgacacagttcgcg
ggtgacaaggctgccatcgaagagcggctgcagctgattgccaagcaaggcatccccaat
tatttcggtgcccagcgctttgggcatgacggcggcaacgtggtcgacgcccgcgcctgg
gctgcgcgcaaggccttgccggagcagcgcaacgtgcgttcgcgcctgctttccacagct
cgcagttttctgttcaaccaggtgttggcggcgcgtgtcgccgacggcacctggcagcaa
gcgcaggtcggcgatctgttggcattcactgacagccgcagcttctttgcggccggcgaa
gctgaatgcagtgacccgcgactggcgattctcgatctgcacccgaccggtccacagtgg
ggcgaaggtgactcgccggccctgggcgctgtccatgaactggagcaggcgatagccgcg
cgcgaagtggaacttcgcgattggttggtcaacgccggaatgagccatgaacgtcgcatc
ctgcggctgcccattgccgggttgacgtggcattatccctcgcctgacattctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtattggtgcgcgagcttgtcgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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