KEGG   Pseudomonas umsongensis: HGP31_06275
Entry
HGP31_06275       CDS       T06842                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pum  Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:pum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pum03400]
    HGP31_06275
Enzymes [BR:pum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HGP31_06275
    5.6.2.6  RNA 3'-5' helicase
     HGP31_06275
DNA repair and recombination proteins [BR:pum03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HGP31_06275
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QJC77923
UniProt: A0AAE7DD17
LinkDB
Position
complement(1406061..1408547)
AA seq 828 aa
MGTTTDFAKRWFTARGWKPFTFQKQVWAAVKQGQSGLLHASTGAGKTYAVWFGALNRFAR
SAPAVETPRKRKPVADPLTALWITPMRALAADTARALQAPLLDLQIPWNVGLRTGDTSSS
ERARQSRRLPTALITTPESLTLMLARADAHTALSTLRMVVVDEWHELLGNKRGVQLQLAL
ARLRRWNPQLIVWGVSATLGNQDHAEQVLIPQGGGINVQGQTDKKLQVDTLLPPAIERFP
WAGHIGLKMLPQVVAQLDDSASSLVFTNTRAQSEIWYQALLEARPDWAGVIALHHSSLSR
ETRDWVESALKEGHLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPG
RVSRVTLVPTHSLELIEAAAAQDAVAQRRIEPRISPHKPLDVLVQHLVSMALGGGFVPDQ
LFDEVRTTWAYRDLTEADWTWALAFVRHGGLSLTAYPDYRRVEPDEQGIWRVPDARLARR
HRMSIGTIVSDASIQLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
TAYVKRSTVKKAAVPRWNGGRMPLSNELAQAVVTRFSEAARGEFSGPQMQALRPLLEVQQ
RWSGLPTSQSLLAEALKSREGWHLFLYPFAGRQVHLGLGSLLAWRVSQQQAVTFSIAVND
YGLELLSATPVDWVQALSPDLLSPDNLLRDVLASLNAGELALRRFREIARIAGLVFAGYP
GAAKSTRQVQASSGLFFEVFKQYDAGNLLLAQAGEEVLREELDIHRLEQTLAHISQLRLD
LHQVKRPTPLGFPLLVERMRESMSSEKLADRIRRMVSDLEITAGTGKA
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgggaaccaccaccgacttcgccaaacgctggttcaccgctcgcggctggaagccgttc
acctttcagaaacaggtgtgggcagccgtcaaacaaggacaatccggtctgctgcacgcc
agcaccggcgccggcaaaacctatgcggtctggttcggcgcgctcaatcgcttcgcacgc
tctgcacctgcggttgaaacaccacgcaaacgaaaacccgtagccgatcccctgaccgct
ctctggataaccccgatgcgcgccctggctgccgacaccgcccgcgcactgcaggcgccg
ctgctcgacttgcagatcccctggaacgtcggcctgcgcacgggtgataccagcagcagc
gaacgtgcacgccagagccgacgcttgcctaccgcgctgatcaccaccccggaaagcctg
acgttgatgctcgcccgagcggatgcacacacagcactctcgaccttgcgcatggtcgtg
gtcgacgaatggcacgaattgctcggcaacaagcgcggcgtgcaactgcaacttgcgctc
gcccgcctgcgccgctggaacccgcaattgatcgtgtggggcgtttccgcgacgctgggc
aatcaggaccacgccgagcaggtattaatcccacagggcggcggtatcaacgttcaaggc
cagacggataaaaaactgcaggttgatacgctgctgccgcccgcgatcgagcgctttcca
tgggccggacatatcggcctgaaaatgttgccgcaggtcgtcgcgcaactggatgacagc
gccagcagcctggttttcaccaatacgcgtgcgcaatcggaaatctggtatcaagcgttg
cttgaagcccgaccggactgggcgggggtgatcgcgttgcatcacagttcgctgtcccgt
gaaacccgtgactgggtggagagtgccctcaaggaaggtcacctcaaagccgtggtctgc
acctccagcctggatctgggcgtggatttcctgccagtggaacgggtgctgcaaattggc
tcggccaaaggcgtggcccgcctgatgcagcgcgccgggcgttccgggcatgcgccggga
cgcgtttcccgggtgacgctggtgccgacgcacagcctggagctgatcgaagccgcagcg
gcacaggatgcagtggcgcagcgacggatcgaacctcgaatatcaccgcataaacccttg
gatgtgctggtccagcatctggtcagcatggcactgggtggcggttttgtgcccgatcag
ttgtttgatgaggtacgcaccacctgggcttatcgtgatctcactgaggcggattggacc
tgggcgctggctttcgtacgtcacggcgggctttccctgacagcctatccggattaccgc
cgggtcgagccggatgaacagggaatctggcgtgtacccgatgcacgattggcccgccgc
catcgcatgagcatcggcacgattgtcagcgatgcgagcattcagttgaaattctggagc
aagggcggcggcggcaaacaactgggcagtgttgaagaaggtttcatcgcgcgacttaag
ccgggcgatggctttctgtttgccgggcggctgctggagttggtacgcgtggaaaacatg
accgcctatgtcaaacgcagcaccgtaaagaaagccgcggtgccgcggtggaatggcggt
cgcatgcccctctccaatgagctggcgcaagcggtggtcacgcgctttagtgaggcggcg
cgcggcgagttcagcggcccgcaaatgcaggcattgcgcccgctgctggaggtacagcaa
cgctggtctggcttgccaacgtcgcaatcgttgctggccgaggcgttgaagtcccgtgag
ggctggcatctattcctgtatcccttcgccggccgtcaggtgcatctgggcctgggcagc
ttgctggcgtggcgagtcagtcagcagcaagccgtgacgttttccatcgcggtcaatgat
tacgggctggaattgctgagtgccaccccggtggactgggtgcaagccctgagtccggac
ttgttgagcccagacaatctgctcagggacgtactcgccagcctgaatgccggagagctg
gccttgcggcgctttcgggaaatagcccggatcgccggactggtgttcgccggttacccc
ggtgcagccaagagcacacgccaggttcaagcctcgagcgggttgtttttcgaagtgttc
aaacagtacgacgcgggcaatttgctattggcccaggccggagaagaagtcctgcgcgag
gaactggatattcatcgcctggaacagacgttggcgcacatcagtcagctacgtctcgac
ctgcatcaagtcaaacgtcctacacccctcgggtttccgctgctggtggaacgtatgaga
gagagcatgagttcagaaaaactcgccgaccgcatccgacgcatggtcagcgaccttgag
ataacagccggaacagggaaagcctga

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