Pseudomonas umsongensis: HGP31_06620
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Entry
HGP31_06620 CDS
T06842
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00061
Fatty acid biosynthesis
pum00071
Fatty acid degradation
pum01100
Metabolic pathways
pum01212
Fatty acid metabolism
pum02024
Quorum sensing
pum04146
Peroxisome
Module
pum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HGP31_06620
00071 Fatty acid degradation
HGP31_06620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HGP31_06620
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGP31_06620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pum01004
]
HGP31_06620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pum04147
]
HGP31_06620
Enzymes [BR:
pum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HGP31_06620
Lipid biosynthesis proteins [BR:
pum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HGP31_06620
Exosome [BR:
pum04147
]
Exosomal proteins
Exosomal proteins of breast milk
HGP31_06620
Exosomal proteins of breast cancer cells
HGP31_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
QJC77990
UniProt:
A0AAE6ZRJ1
LinkDB
All DBs
Position
1480844..1482544
Genome browser
AA seq
566 aa
AA seq
DB search
MIEDFWKDKYPAGIAANINPDEYPNIQAVLKQSCQRFANKPAFSNLGRTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAETVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSKGHGQPVTEASPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCKIVNDAGVEQPLGEIGELCVKGPQVMKGYWQ
RQEATDEILDSEGWLKTGDIALIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKINAKKTAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtacccagctggaattgctgccaacatcaatcca
gacgagtacccgaatattcaggcagtgttgaagcagtcctgccaacgcttcgccaacaaa
ccggcattcagcaacctgggcaggacaatcacctacggtgagctgtacgaattgtccggt
gcctttgccgcttacctgcaacagcataccgatttacagccgggcgatcgaatcgccgtg
caactgcctaacgtgttgcagtacccggttgccgtcttcggcgccatccgagccggcttg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggagcaccagttcaacgac
tccggtgccaaagccctggtttgcctggccaacatggcgcacctggctgaaaccgtcgtg
ccgaaaaccggggtcaagcatgtaatcgtcacagaagtggcggacctgctgccaccgctc
aagcgcctgctgatcaacagcgtgatcaagtatgtgaagaagatggtgccggcctatcac
ttgcccaaagccgtcaagttcaacgatgtgctgagcaagggccatggccagcccgtgacc
gaagccagcccggccagcagcgatgtcgcggtgctgcaatacaccggcggcaccactggc
gtcgccaagggcgcgatgctgacccaccgcaacctggtggcgaacatgctgcagtgcaag
gcgttgatgggctccaaccttaatgaaggctgcgagatcctgatcacgccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggtttcgtcggcctcaacaccttgttcgtggccctgtgcaacaacgaaggcttc
cgcaagctggatttttcggcgctgaaagtcactctgtccggcggcatggccctgcaactg
gcggcggccgagcgctggaaagcagtcaccggttgcgccatctgcgaaggttacggcatg
accgaaaccagccctgtggccacggtcaacccgatccagaacatccagatcggcaccatc
ggcattccggtgccgtcgaccctgtgcaaaatcgtcaatgatgccggtgtcgaacagcca
ttgggcgaaatcggtgagttgtgcgtgaaaggcccgcaagtcatgaagggctactggcag
cgccaggaagccaccgatgaaatcctcgacagcgaaggctggttgaaaaccggcgacatc
gcgctgatccaggcggatggctacatgcgcattgtcgatcgcaagaaagacatgatcctg
gtgtccggcttcaacgtgtacccgaacgagctcgaagacgtgctggcgaccctgccgggc
gtgctgcaatgcgcggccatcggtgtaccggacgagaaatcgggcgaggcgatcaagata
ttcatcgtcgccaagccgggcgtgaccctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcaccggctacaaggttccaaaagcggtggagttccgcgatgcgctgccgacc
accaacgtcggcaagatcctgcgtcgtgaactgcgtgatgaagagttgaagaagatcaac
gcgaagaaaaccgccgcgtaa
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