Pseudomonas umsongensis: HGP31_08885
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Entry
HGP31_08885 CDS
T06842
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pum03032
]
HGP31_08885 (gyrA)
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_08885 (gyrA)
Enzymes [BR:
pum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HGP31_08885 (gyrA)
DNA replication proteins [BR:
pum03032
]
Prokaryotic type
DNA Topoisomerases
HGP31_08885 (gyrA)
DNA repair and recombination proteins [BR:
pum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGP31_08885 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QJC78423
UniProt:
A0AAE6ZT91
LinkDB
All DBs
Position
1948853..1951507
Genome browser
AA seq
884 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEDR
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHFIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAITEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLANDETLVGLERV
QEPSEVEGEELEGEEGAVFEGTAVIDDIVEDQQLDAAADEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaagcagtcc
tacctcgactacgcgatgagcgtaattgtcgggcgggcactgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcacccgcac
ggtgacaccgcggtgtacgacaccatcgttcggatggcgcagccattttccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggctgacctgcacaaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgatggttgcctggcgctcatcgacaac
cccgagctgaccgtcgacgagctgatgcagtacatccccggtccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaggcttaccgtaccggtcgcgggcgcatc
tacatgcgcgcccgctcgatgatcgaagacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgaactcccttaccagctgaacaaagcccgtctgatcgagaagatcgccgag
ttggtcaaggagaagaagctcgaaggtatcaccgagctgcgcgacgagtccgacaaggat
ggtatgcgcgtcgtgatcgagctgcgtcgcggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaagcggtattcggcatcaacatcgtcgcgctgatcgac
ggccgtccacgcatcctgaacctcaaggacctgctggaagccttcgtgcgtcaccgtcgc
gaagtcgtcactcgtcgtaccgtgttcgaactgcgcaaggcgcgcgagcgtgggcacatc
ctcgaaggtcaagcggttgccctgtcgaacatcgacccggtcatcgccctgatcaaggct
tcgccgaccccgtcggaagccaaggaagcgctggtcagcaccccttgggagtcctcggcg
gtagtggcgatggttgaacgtgccggcgccgattcgtgccgtccggaaaacctcgacccg
cagtacggcctgcgcgacggcaagtacttcctgtcgccagagcaggcgcaagccatcctg
gaactgcgtctgcaccgcctgaccggcctggaacacgaaaagctgctggccgagtatcaa
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgtgccgaatacggcgacgtgcgccgtacc
gaaatcctcgatgcgcgtctagacctgaccctgggcgacatgatcccggaagaagatcgc
gtggtgaccatttcccacggtggctatgccaagacccagccactggcggcgtaccaggcc
cagcgtcgtggcggtaaaggcaagtcggcgaccggtgtcaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaaaacctacgaaatccctgaagcctcccgtgctgcccgtggtcgtccgctg
gtcaacctgctgccgctggatgacggtgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggccaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgtcaacgcagcgtcggcctgatcgcgctggagctggacgaaggc
gacgtgctgatttccgcggccattaccgatggcgagcgcgaagtcatgctgttctccgac
ggcggcaaggtaacgcgcttcaaggaatccgacgttcgtgccatgggccgtaccgctcgt
ggtgtgcgcggcatgcgcctgccagaaggtcagaagctgatttccatgctgatcccggaa
gaaggcagccagatcctcaccgcttcggcgcgtggttatggcaagcgtacggcgatcacc
gagttccctgagtataagcgtggcggccagggcgtgatcgccatggtcagcaacgagcgc
aacggccgtctggtcggtgcggtccaggtgctcgacggcgaggaaatcatgctgatttcc
gaccagggcaccctggtgcgcacccgtgtcgacgaagtgtcgagcctggggcgtaatacc
cagggcgtgaccctgatcaagctggccaacgatgaaacgctggttggcctggagcgcgtc
caggagccttcggaagtcgagggtgaagagctggaaggcgaagaaggtgctgtgttcgaa
ggcactgcagtgatcgacgacatcgtcgaagaccagcaactcgacgccgccgctgacgaa
gaaccacaggaataa
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