Pseudomonas umsongensis: HGP31_08915
Help
Entry
HGP31_08915 CDS
T06842
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pum
Pseudomonas umsongensis
Pathway
pum03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HGP31_08915 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pum03011
]
HGP31_08915 (rpsA)
Ribosome [BR:
pum03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HGP31_08915 (rpsA)
Bacteria
HGP31_08915 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QJC78429
UniProt:
A0AAE6ZUK6
LinkDB
All DBs
Position
1958105..1959799
Genome browser
AA seq
564 aa
AA seq
DB search
MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAG
DLTINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPEGTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGIVKEVDAKGAIITLADDIEATL
KASEISRDRVEDARNVLKEGEEVEAKIISVDRKSRVIQLSIKSKDVEDEKEAIQSLRDKP
VAGDAPVATTLGDLLRAAQAEKQN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcggaactctttgaagaaagcctaaaaaccctgaaccttcaggca
ggctccatcatcaccggtgttatcgttgatatcgattaccaagctcgctgggtaaccgtt
cacgctggcctgaagtctgaagcactcatcccgcttgagcagttctacaacgacgctggc
gacctgactatcaacgtcggtgacgaagttcacgttgcgctggactcggttgaagacggc
tttggcgaaaccaagctgtcccgtgaaaaagccaagcgcgctgaatgctggattgttctg
gaagcagccttcgcagccgaagaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgccaggttctctggttgacgtc
cgtccagtgcgcgacaccacgcacctggaaggcaaagagctggaattcaaggtcatcaag
ctggaccagaagcgcaacaacgttgtcgtttcccgtcgtagcgtcctggaagccgagaac
tccgccgagcgcgaagctctgctggaatccctgcaggaaggccagcaagtcaaaggtatc
gtcaagaacctcaccgattacggcgcattcgtcgatctgggtggcgtggacggcctgctg
cacatcaccgacatggcctggaagcgcatcaagcatccttccgaaatcgtcaacgttggt
gacgaaatcgacgttaaggttctgaaatacgatcgcgaacgcaaccgtgtttccctgggc
ctgaagcaactgggcgaagatccatgggttgctatcaaagcccgttacccagaaggcact
cgcgttaccgctcgtgtaaccaacctgaccgactacggctgcttcgctgagctggaagaa
ggcgttgaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccaccct
tcgaaagtcgtacaagtcggcgacgaagtggaagttatggttctggacatcgacgaagag
cgtcgtcgtatctccctgggcatcaagcagtgcaaatctaacccatgggaagatttctct
ggccagttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggcctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagctgttcgtcgcttcaagaagggcgacgagctggacaccgtt
atcctgtcggttgacccagagcgcgagcgcatctccctgggtatcaagcaactggaaagc
gatccgttctccgagtacgttcaagagaacgacaaaggcgcaatcgttaagggcatcgtg
aaagaagttgacgctaaaggcgccatcatcaccctggccgacgatatcgaagcgactctg
aaagcctccgaaatcagccgtgaccgcgttgaagacgcgcgcaacgttctgaaagaaggc
gaagaagtagaagccaagatcatcagcgttgatcgcaagagccgcgtaatccagctctcg
atcaagtcgaaagacgttgaagacgagaaagaagctatccagagcctgcgcgacaagcca
gtagctggtgacgctccagtagccaccaccctgggtgacctgctgcgtgctgcacaagcg
gaaaaacagaactaa
DBGET
integrated database retrieval system
