Pseudomonas umsongensis: HGP31_09395
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Entry
HGP31_09395 CDS
T06842
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00071
Fatty acid degradation
pum00280
Valine, leucine and isoleucine degradation
pum00310
Lysine degradation
pum00362
Benzoate degradation
pum00380
Tryptophan metabolism
pum00410
beta-Alanine metabolism
pum00640
Propanoate metabolism
pum00650
Butanoate metabolism
pum00907
Pinene, camphor and geraniol degradation
pum00930
Caprolactam degradation
pum01100
Metabolic pathways
pum01110
Biosynthesis of secondary metabolites
pum01120
Microbial metabolism in diverse environments
pum01200
Carbon metabolism
pum01212
Fatty acid metabolism
Module
pum_M00087
beta-Oxidation
pum_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HGP31_09395 (fadB)
00650 Butanoate metabolism
HGP31_09395 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HGP31_09395 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HGP31_09395 (fadB)
00310 Lysine degradation
HGP31_09395 (fadB)
00380 Tryptophan metabolism
HGP31_09395 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HGP31_09395 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HGP31_09395 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HGP31_09395 (fadB)
00930 Caprolactam degradation
HGP31_09395 (fadB)
Enzymes [BR:
pum01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HGP31_09395 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HGP31_09395 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HGP31_09395 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HGP31_09395 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QJC78514
UniProt:
A0AAE6ZUD4
LinkDB
All DBs
Position
2075913..2078060
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGTDNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQEAALEMIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTAAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDTRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtggacgccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctg
ccggatgcagagcttgtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtcccgactgtcgccgcgatcaatggcatcgcgttgggcggtggtctggaa
atgtgcctggcagcggactttcgcgtcatgtcgaccaaggccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgcctgccgcgcctgatcggt
accgataacgccatcgagtggatcgccgccggcaaggaaaaccgtcctgaagacgcgctg
aaagtcggtgccgtcgatgccgtggttgcccctgaaaagctccaggaagctgcgctggaa
atgatcaagcgcgccatttccggcgagttcgactacaaggccaagcgccagccgaagctt
gaaaagctcaagctgaacgcaatcgaacaaatgatggcgttcgaaaccgccaagggtttc
gtggccggtcaagcgggcccgaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggccctggaaatcgaagccgccggcttcgtcaag
ctggccaagaccgccgctgcacagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaagccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactg
ggcgccggtatcatgggtggcggcatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcaggggctggccgaagccgccaaactg
ctggttggccgcgttgacaagggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggtgatttcggtcacgtggacctggtggttgaagcc
gtcgtcgagaacccgaaggtcaagcaagctgttctggccgaagtcgaagacaaggtcaag
gaggacaccatcctcgcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggcagtggccactaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgattgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaaggtcatggaaaaattcggctggccgatgggtccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtgatggctgaaggcttc
ccggaccgcatgaaggacgacactcgctcggccgtggacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagaagggcaagcaa
aagaaagttgccgacccgtcggttctggaagtgctcaagccaatcgtctttgaacagcgc
gaagtcaccgatgaagacatcatcaactggatgatgatcccactgtgcctggaaaccgtg
cgttgcctggaagacggcattgtcgaaaccgccgccgaagccgacatgggcctagtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gcagagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcaaaactgcgtgaaatggccaagaccggccagcggttcttcggttaa
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