Pseudomonas umsongensis: HGP31_09940
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Entry
HGP31_09940 CDS
T06842
Symbol
pcaQ
Name
(GenBank) pca operon transcription factor PcaQ
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pum03000
]
HGP31_09940 (pcaQ)
Transcription factors [BR:
pum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HGP31_09940 (pcaQ)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Mga
Motif
Other DBs
NCBI-ProteinID:
QJC78619
UniProt:
A0AAE6ZUM4
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Position
complement(2212046..2212975)
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AA seq
309 aa
AA seq
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MNIDNRIKFRHLLCFLEVARQGSLARACDKLAISQPALSKTLKELETLLDARLFERGKKG
STLTEAGVAFLRYAGPSVQALRDGVNSLRSGVHEPITVQLGVLSTVESLLVPEVVCRLHD
RHPALVVSVVTGPSAYLLSRLRVGELDLVVGRMTDSPLIQGLAFEHLYSESMTLVVRSGH
PVLNDPSGQKNLEDYPLVLPSAGTTIRKFADSLFVQHGITPSRQRLETLSVALSRRYVLC
SQAIWVAPLDAVRQDLRQGELVELDLGMREPGGSVGLCTNPALPVSPAAQWCVEALREVG
QEYREGQYP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatcgataaccgaatcaaattccggcatctgctgtgttttctcgaggtggcacgc
cagggcagcctggcacgtgcctgcgacaaattggcgatcagccagccagcgctttccaaa
accttgaaggaactggaaaccctgctcgatgccaggctgtttgaacggggtaaaaagggc
tcgacgctgaccgaagccggcgtggccttcctgcgatacgcagggccgagcgtgcaagcg
ctgcgcgacggggtcaacagtttgcgctcgggcgtgcatgagcccattaccgtgcagctc
ggcgtgctatccacggtcgaaagcctgttggtaccggaagtagtctgccgcctgcacgac
cgtcacccggcgttggtggtcagtgtcgtgactggcccaagtgcctatttgctgtcccga
ctgcgggtcggtgagctggacctggtggtgggccggatgaccgatagcccactgatacaa
gggctcgcgttcgagcacttgtacagcgaatccatgaccctggtggtccgcagcggccac
ccggtgctcaacgatccgtcgggacagaaaaacctcgaagactatccgctggtattgccg
tcggcggggacgacgatccgcaaattcgccgacagcctgttcgtccagcacggaataaca
ccatcgcgccaacgcctggaaaccttgtcggtggccctgagtcggcgctacgtgctgtgc
agccaggctatctgggtcgcccctctcgacgctgtcaggcaggatttgcgacagggtgag
ttggtcgagctggaccttggaatgcgtgagccgggtggctccgtcgggctgtgcaccaat
cccgcgttaccggtatcgccggcggcgcagtggtgcgtggaggcactgcgcgaggtcggt
caggagtatcgcgaaggccagtatccataa
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