Pseudomonas umsongensis: HGP31_10105
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Entry
HGP31_10105 CDS
T06842
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pum03000
]
HGP31_10105
Transcription factors [BR:
pum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HGP31_10105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QJC78651
UniProt:
A0AAE6ZV93
LinkDB
All DBs
Position
2247891..2248763
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AA seq
290 aa
AA seq
DB search
MYQYHKWLRSFHAVAKTGSFTLAAEYLSVGQPTVSEQVTALEKKFSVELFHRRGRIVEMS
SAGHKLYAITQGLFGQEDEAVQLLQSFKQRKTGMLRLGAVSPPIAMNLTYELMQRHPDIE
LETSFSPEKETLDRLFNFDIDVAILALSEFDQRFDTQLYRRYPIIAVVRDDHPWAAQKAV
HVEQISDEKWVLREKSSRTRQLVEESCDRLDVDLNCVMQLNSREAIVHAIAKGIGIGFVS
AVEYAETPGTKPITFVDHPFFIDYHLCCLGIRRNRPMIAELFDSSPIPAT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtaccacaagtggctgcgttcctttcatgcggtggccaagaccggcagtttc
accctggccgccgagtacctgagcgttgggcaaccgacagtcagtgagcaggtcacggcg
ctggaaaagaagttttccgtggagctctttcatcgacgcgggcgcatcgtcgagatgagc
tcggcgggacacaagctgtatgccatcacccagggtctctttggccaagaggacgaagcc
gtgcaacttctacagagtttcaagcaacgtaaaaccgggatgttgcgcctgggtgccgtc
tcgccgcccattgcaatgaacctgacgtacgagttgatgcagcggcatccggacattgag
ttggaaacatcattctcgccggaaaaagagaccctggaccgcctgttcaatttcgacatc
gacgtggccatcctggcgctgtccgaattcgaccagcgttttgatacgcagctttatcgg
cgttatcccatcattgctgtcgtgcgcgacgatcacccctgggctgcgcagaaggcggtg
cacgttgaacagatcagcgacgagaagtgggtccttcgggaaaaaagctcccgcactcgc
caactggtggaggagagttgcgatcgccttgatgtcgacctgaactgcgtcatgcaattg
aacagccgcgaagccatcgttcacgccatcgccaagggaatcggcatcgggttcgtatcg
gctgtcgaatacgccgaaacgccgggaacaaagccaatcacctttgtcgatcatccgttt
ttcattgattaccacctgtgttgcctgggtattcgcagaaaccggccgatgatcgccgag
ctgttcgattccagtccgatcccggccacctga
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