Pseudomonas umsongensis: HGP31_12350
Help
Entry
HGP31_12350 CDS
T06842
Name
(GenBank) cytochrome D1
Organism
pum
Pseudomonas umsongensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cytochrom_D1
YNCE
Lactonase
YtkA
FixH
DUF6528
Motif
Other DBs
NCBI-ProteinID:
QJC79060
LinkDB
All DBs
Position
2688445..2690397
Genome browser
AA seq
650 aa
AA seq
DB search
MNRTIKIASVALVVGVALIWLGVWRTSPPTLLGDIALPDTWTGQTLERDGVSVALEVRPL
AADGVLREGEFADVRFNVTDKASGQPLAGVAPGAWIDPETVAADQAQGREQSCKARVGVF
LKSSIGARPLLDLNSYFLMVMNRDASVSVVDPSVSVGGITSTMTRIDIKQPPMDWVTPRD
NKRVFVSMPTAGEVAVIDSEQFKLLDSVAAGSNPVRVALQPDERLLWVGNNAPSAELSGI
TVIDTASLKTLKHLATGSGHHEIAFSKDSRFAFVTNRDDGTLSIIDVATLTIAKQLKTGS
HPLSVVYSTLSGAAYVADGKDGTVTVVDAANQSVRRVIKIKQGLGPMGFSADGRFGIVLN
TLENQAAVIDAATDSLIHELDVSAEPYQVVFTKAYAYVRGLASPKVTMINLASLGEGRKP
ISQGFEAGPQPPRLAGDLPLASSLAVSRDDNAVFVVNPVDNTTYFYAEGMNAPMSGYPNR
GQVARAALVIDRSLREVEPGLYSARIKLPAAGRFDVAFLLNQPNIIHCFSAVVEPNASLG
PVAGIPKVEFMLDKTTAALGSPYVVRFRIVQGKQKVQRSGVKDVQVRYFLAPSSRPQYVA
ALDVGNGIYEAPVTLDQQGAWYLHVRAASLGANFDDQTFASVRVTPGIAH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaccatcaaaatcgccagtgttgccctggtcgtaggggttgcgctgatctgg
ctcggggtgtggcgcacgtcgccaccgaccctgcttggcgacatcgcgctgcccgacacc
tggaccggccagacgcttgaacgtgacggcgtgtcggtggccctcgaagtgcggccgctg
gctgcagacggcgtgttgcgcgagggtgaatttgccgatgtgcgtttcaatgtcaccgac
aaggcgtcgggccaaccgctggcgggcgttgcccccggcgcctggatcgacccagagacc
gtcgccgctgaccaggcccaaggccgcgagcagagctgcaaggcgcgggtcggggtgttc
cttaaatcaagtatcggcgcacggccgctgctcgacctcaacagctacttcctgatggtg
atgaaccgcgatgccagcgtctcggtggtcgacccctcggtctcggtgggcggcatcacc
agcactatgacccgcatcgatatcaagcaaccgccgatggattgggtcacccccagggac
aacaaacgggtgttcgtgtcgatgcccacggcgggtgaagtcgcggtgatcgacagtgag
caattcaagctgctcgactcggtggccgcgggcagcaatccggtgcgcgtggccttgcaa
ccggacgagcgcctgctgtgggtcggcaacaatgccccgtcggccgagctctccgggatc
acggtgatcgacaccgccagcctcaagaccctcaagcacctggcaactggcagtggccac
cacgaaatcgccttcagcaaggacagccgcttcgcctttgtcaccaaccgcgacgacggc
accctgagcatcatcgatgtcgccaccttgaccatcgccaagcagctcaagaccggttcg
cacccgctgtcggtggtgtactcgacactgtccggcgcggcctatgtggccgatggcaag
gacggcacggtgaccgtggtcgacgcggcgaaccagtcggtgcggcgggtgatcaagatc
aagcagggcctcggcccgatgggtttcagcgccgacggccgtttcggcatcgtgctcaat
accctggagaaccaggccgcggtgatcgacgccgccaccgattcgctgatccatgaactg
gacgtgtccgccgaaccctatcaagtggtgttcaccaaggcctatgcctacgtgcgcgga
ctggcctcgcccaaggtcacgatgatcaacctggcgtccctcggtgaaggccgcaagccg
atcagccagggcttcgaagccgggccgcaaccgccgcgcctggccggcgacttgccgctg
gcgtcgagcctggcggtgtcgcgggacgacaacgcggtgtttgtggtcaacccggtggac
aacaccacctacttctacgccgaaggcatgaacgcgccgatgtccggctaccccaatcgc
gggcaagtggcgcgggcggcgctggtcatcgaccgcagcctgcgcgaagtcgaaccgggg
ctgtacagcgcgcggatcaagctgccggcggcggggcgcttcgacgtggcgttcctgctc
aaccagcccaacatcatccactgcttcagcgccgtggttgagccgaacgcaagcctgggc
cccgtcgccggcatcccgaaagtcgagttcatgctcgacaaaaccacggccgccctgggt
agcccttatgtcgtgcgctttcgcatcgtccagggcaaacagaaggtccagcgcagcggg
gtcaaggacgtgcaggtgcgctacttcctggcgcccagttcacggccccagtacgtcgcg
gcactggacgtcggcaatggcatctacgaagccccggtcacccttgaccagcaaggcgcc
tggtacctgcacgtgcgtgcggcgtccctgggcgcgaatttcgacgaccagacgtttgcc
agcgttcgggtgacccccggcattgctcattga
DBGET
integrated database retrieval system
