Pseudomonas umsongensis: HGP31_13145
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Entry
HGP31_13145 CDS
T06842
Name
(GenBank) OprD family porin
Organism
pum
Pseudomonas umsongensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QJC79214
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All DBs
Position
2875246..2876571
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AA seq
441 aa
AA seq
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MFKRAIPAAILLFGGSIGAQAAEPGARGFLEDSKASLSMRTLYFNSDNRDGSADPSKTEE
AAQGFVLRYESGFTQGTLGFGLDAQALQGITLDSGAGRHVGSGMIPSKGDGAADAWSSFG
PTAKMRIAKTELRYGTLLPKLPILLSNDARVLPQSFTGGQVTSKDIDGLTLTGGLLEHAV
GRASTDRTGLSVAGGTRDSNKFYFAGGDYEVTKALKAQYYFAQLEDFYNQNFLGLTHSLA
IDSASAITTDLRYFRTTSSGANSSAAGRAQGYRVSGYTDDNNGEIDNDTWAAMVTYTNGG
HAVALGYQQVGDGSNFVQPNQGSLVDKGAGGGSVYLPTDRMIQSFARAGEQTRFGQYTYD
FAPLGIPGLKASVAYLKGTDIKAQNAADQSEWERDMTLDYVIQSGSLRGLAFSVRNGKSN
TDAGRNVEQNRFIINYTLSLL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgagcaattcccgccgccatcctgttgttcggcggttcgatcggcgcacag
gcagcagagcctggcgcacgcggctttctggaagacagcaaggccagcctttccatgcgt
accctgtactttaacagcgataaccgcgacggcagcgcagacccttccaagaccgaagag
gcggcccagggttttgtgctgcgttatgagtcgggattcacccaaggcaccctggggttc
gggcttgatgcccaggcgttgcaagggattaccctggacagcggcgccggtcgccacgtc
ggcagcggcatgattccctcgaagggcgacggtgcggccgatgcctggagcagcttcggt
cccacggcgaagatgcgcatcgccaagaccgaactgcgttacggcacgttgttgccgaag
ctgccgatactgctgtccaacgatgcccgcgtgctgccgcaatcgttcaccggcggccag
gtcacgtcaaaagacatcgatggcctgaccctgaccggcgggttgctggagcacgcagtc
ggtcgtgcctcgaccgatcgaaccggcctgtcggttgccggtggtacccgggacagcaac
aagttctatttcgccgggggcgactacgaggtgaccaaggcgctgaaggcacagtactac
ttcgcgcagttggaagatttctacaaccagaacttcctcggcctgacacacagcctggcc
atcgacagtgcaagcgccatcaccacggacctgcgctatttccgcaccacctccagcggt
gccaacagctccgccgcaggtagagctcaaggctatcgcgtctcgggttacaccgatgac
aacaacggtgaaatcgataacgacacctgggctgccatggttacctataccaacggcggc
catgccgtggcgctcggttaccagcaagtgggcgatggcagcaacttcgtccagcccaac
cagggcagcctggtggataaaggcgcgggtggtggcagcgtctacttgcccaccgatcgc
atgatccagagctttgcccgcgccggggagcaaacccgtttcggtcaatacacctatgac
ttcgcaccccttggaatcccgggcctgaaggcgtcagtggcgtatctcaagggcacggat
atcaaggcgcaaaacgctgcggaccagtctgagtgggagcgtgatatgacgctggactat
gtgattcagtcgggttcgctcagggggcttgccttcagcgtgcgcaatggcaagtcgaac
accgatgccgggcgcaatgttgagcagaatcgcttcatcatcaactacaccctgtcgctg
ctgtaa
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