Pseudomonas umsongensis: HGP31_14385
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Entry
HGP31_14385 CDS
T06842
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pum01011
]
HGP31_14385
Enzymes [BR:
pum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HGP31_14385
Peptidoglycan biosynthesis and degradation proteins [BR:
pum01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HGP31_14385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM_RLK
LysM3_LYK4_5
LysM_OapA
CRISPR_Cas9_WED
Motif
Other DBs
NCBI-ProteinID:
QJC79452
UniProt:
A0AAE7DE36
LinkDB
All DBs
Position
complement(3152105..3153541)
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AA seq
478 aa
AA seq
DB search
MSSSIRKAINSDALTRLAQAIAVAVSATLAGCSSHVPQTDAAHAPNIAARAKQKPVFLTE
KPSPQIPQDVWERMRQGFQLQDGLGVNPRIEQQRLWFASNPSFLENAGDRGSLYIHYIVE
RLEERNMPLELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDIT
ASTTAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPAET
QAYVPKLLALSQVVMAPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQ
LNPAFKQRTTIDGPQHLLVPTSKAQLLTTSLQTMRPEELISKKQLKPVFEGADDTQLASA
KRSYRVKRGDNLGSIAKANNVDVKDLQRWNKLSGKNLKPGQTLVMQDTGKRNSGRINTVV
AAKSKTQKPQSQYKVQQGDSLYMVAKRFNVEMQHLKRWNPRVGQALKPGQMLTVSSPH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatctatacgcaaagccatcaattcggacgcactgacccgcctggcgcaagcc
atagcggtggctgtgtccgcgacattggcgggctgttccagtcatgtgccgcagaccgat
gcggcacacgcaccgaatattgccgcgcgcgccaagcagaaacccgtcttcctcactgaa
aagcccagcccacagatcccgcaggatgtctgggagcgtatgcgccagggtttccagctg
caggatggcctgggcgtcaacccgcgcatcgagcagcaacgactgtggttcgccagcaac
ccgtcgtttctcgaaaacgccggcgatcgcggcagcctgtacatccactacatcgtcgag
cgccttgaagaacgcaacatgccgctggaactggcgctgctgccagtgattgaaagcgcc
tacaacccgatggcttattcccgggccaatgcagtgggcttgtggcagttcattccctcc
accggacgttacttcaacctgcgccagacccgtttttatgatggccggcgcgatatcacc
gcttcgacgacggcggccatggactacctgacccgcctgcacgacatgttcaacggcgac
tggctgctggccctggccgcctacaacgccggtgaaggcacggtcagccgtgccatcgaa
cgcaacgagcgactcggcctgccaaccgattactggaacctgcccctgcccgccgagacc
caggcctatgtgccgaagttgctggcactctcgcaggtggtgatggcgccggacgcctac
ggcgtgaacctcaacccgattgccaacgaaccgtatttccaggtcgtcgaaatcaaccag
cgcatggacctgtccaaggtcgccgcggtggccaacatcgacgaagacgaactgttccag
ctcaaccccgctttcaagcaacgcaccaccatcgacggcccgcagcacttgctggtaccc
acctccaaagcacaactgctgaccaccagcctgcagaccatgcgccccgaagagttgatc
agcaagaagcagctcaagccggttttcgaaggcgcggacgatacgcaactggcgagcgcc
aaacgtagctatcgggtcaaacgcggcgataacctgggctccatcgccaaggccaacaat
gtcgacgtcaaggacctgcaacgctggaacaagttgagcggcaagaatctcaagcctggc
cagacgctggtcatgcaagacaccggcaagcgcaactcgggacgcatcaacaccgtggtc
gcggccaagtcgaagacccagaagccgcagtcgcaatacaaagtccagcaaggcgattcg
ctatacatggtagccaagcgcttcaacgttgaaatgcagcacctcaagcgctggaatcct
cgtgtcggccaggcgttgaagccggggcaaatgttgacggtttccagtccgcattaa
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