Pseudomonas umsongensis: HGP31_14960
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Entry
HGP31_14960 CDS
T06842
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pum
Pseudomonas umsongensis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
HTH_8
V4R
AAA_5
Mg_chelatase
AAA_16
AAA_2
AAA
HTH_30
AAA_3
HTH_1
HTH_28
AAA_7
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QJC79559
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Position
complement(3306084..3307766)
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AA seq
560 aa
AA seq
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MTMKYRASEHSAQLKDLTDRVHFLGGEGKIWLDEQRMMLMQVSAMASFRRELIEMIGAER
AKGFFLRLGYQSGLKDAQLARKLRPNASDIDMFLIGPQLHSLKGMVKVRPLKMDIDIEAG
TFYADIEWIDSFEVENHQSEQLHSDQPICWMLLGYAISYSSFFIGRQIIYKEVSCRGCGD
TMCRIIGKPAEEWEDADTFMRYFQSDSIIDELHTLQLQVENMNQRLQLGAGQFYGIGRSA
IYRKTCDLIDKVAPGKASVLLLGETGVGKEVIARSLHLRSERAGGPFIALNCAAISPDLI
EAELFGVEKGAYTGAQQARMGRFERAHGGTLFLDEIIELTPRAQASLLRVLQEGELERVG
DNQTRTVDVRVIGATHEDLAQAVKEGRFRADLYYRLNVYPVRVPALRERREDIPLLIEHF
LEKLHQSYQKKTLGLSDRASEACLRYDWPGNIRELQNLIERGVIITDSNQSISVEALFPH
QSDEAYSIGLSSEGALISQKLAPTDEWVGCLLDLGVSLEAMEEQLLQGAMERAGQNVSEA
ARLLGMTRPALAYRLKKKPD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaaataccgggcctccgagcattctgcacagctcaaggacctgaccgaccgc
gtgcactttctcggcggcgaaggaaagatctggctcgatgagcaacgcatgatgctgatg
caggtttcggcgatggcgtcgtttcgcagggagctgatcgagatgatcggagcagaacgt
gcaaagggctttttccttcgcctgggctatcagtccgggctcaaggatgcgcagctggca
cgaaaactacggcccaatgccagtgacatcgatatgttccttatcggaccgcaactgcac
tcgctcaagggcatggtcaaggtgcgtccgttgaagatggacatcgatatcgaggccgga
accttctatgccgacatcgagtggatagactctttcgaagtggaaaaccaccagagtgaa
caactgcattccgatcagccgatttgctggatgctcctgggctacgcaatcagctattcg
tcgtttttcatcggccggcagatcatttacaaggaggtcagctgccggggatgcggggac
acaatgtgtcggattatcggcaagcccgccgaggaatgggaggatgccgacacgttcatg
cgctatttccaaagtgattcaatcatcgatgaattacacaccctgcagcttcaagtagaa
aacatgaaccagcgcctgcaactgggtgcaggccagttttacggcatcggccggtcagcg
atctaccgcaagacctgcgacctgatcgacaaagtcgccccaggcaaggcttcagtcctg
ctactgggtgaaaccggcgtcggcaaggaagtcatcgcgcgcagtctgcatttgcgcagc
gagcgcgctggcggtcctttcatagccctgaactgcgcagccatctcgccagacctgatt
gaagcggagctgtttggcgtcgaaaaaggcgcttacaccggcgctcaacaagcgcgcatg
ggtcgcttcgagcgcgcccatggcggcaccttgtttctcgatgaaatcatcgaactgacg
cctcgtgcccaagccagcctgctacgggtgttgcaggagggcgagctggaacgggtgggc
gataaccagacgcgcacggtggatgttcgcgtcatcggtgctacgcatgaggatctcgcg
caggcggtgaaggaaggacgttttcgtgccgacctttattaccgattgaacgtgtacccg
gtgcgggtgcccgcgttgcgcgagcgtcgcgaagacatcccgctgttgattgagcacttc
cttgaaaagctgcatcagagctaccagaaaaaaaccctcggcctgtcggatcgcgccagc
gaggcctgtttgcgctacgactggccaggcaatatccgtgagctgcaaaatctcatcgaa
cgtggcgtgatcatcacagacagcaatcagagcatttccgtggaggcactgttcccgcac
cagtccgacgaggcctacagtattggcctgtcgagcgaaggtgctttgatcagccagaag
ctggcgcccaccgatgagtgggtgggctgcctgctcgatcttggagtgagccttgaagcc
atggaagagcaactcctgcaaggtgccatggaacgcgccgggcagaacgtttcggaagca
gcgcgcctgctcggaatgacgcgaccggcactggcttaccggctgaaaaagaagccggat
tga
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