Pseudomonas umsongensis: HGP31_16270
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Entry
HGP31_16270 CDS
T06842
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pum
Pseudomonas umsongensis
Pathway
pum03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HGP31_16270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_16270
DNA repair and recombination proteins [BR:
pum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HGP31_16270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HEAT_MROH2B_C
Motif
Other DBs
NCBI-ProteinID:
QJC79798
UniProt:
A0AAE7DEW2
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All DBs
Position
3609312..3610172
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AA seq
286 aa
AA seq
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MARAIWKGAISFGLVHIPVALVSATSSHGVDFDWLDSRSMDPVGYKRVNKVTGKEVTKEH
IVKGVQYEKGRYVVLSEEEIRSAHPLSTQTIDIFAFVDSKQIPLQNIDTPYYLAPDKRGG
KVYALLRETLTKTNKVALARVVLHTRQYLAALMPLESAMVLVKLRWPAEVRSLDELALGP
DVTKAELAKGELDMAKRLVEDMSVEWSPDDYRDEFEDKIMALVDKKAHEGKIEDVETATG
EEERKTADVIDLTELLKRSLGGKGGSKETAKPKSPTKPAARKKVSK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcgatcagtttcgggctggtgcatatccctgtggcg
ctggtctcggcgacgtcctcccacggggtggatttcgactggctcgacagtcgcagcatg
gacccggtgggctacaaacgcgtcaataaagtcaccggcaaggaagtcaccaaagagcac
atcgtcaaaggcgtgcaatacgaaaaaggtcgatatgtggtgctcagcgaggaggagatt
cgctcggcgcatccactctcgacccagactatcgacatctttgcctttgtcgacagcaag
caaatcccgctgcagaacatcgacacgccctactacctggcaccggataaacggggcggc
aaggtctatgccctgttgcgtgaaaccttgaccaaaaccaataaagtcgcgctggcccgc
gtggtgctgcatacccgccaatacctggcggccttgatgccgctggaatcggccatggtc
ctcgtgaagctgcgctggccggcggaagtgcgcagcctggacgagttggcattaggcccg
gatgtgaccaaggccgagttggccaagggcgaactcgacatggccaagcgcctggtagag
gacatgagcgtcgaatggtcgccggacgactaccgggacgaattcgaagacaagatcatg
gccctggtggacaagaaagcccatgaagggaaaatcgaggatgttgaaacagccactggc
gaggaggagcgcaagaccgcggatgtcattgacttgactgagttgctcaagcgtagcctg
gggggcaagggagggagcaaggagacggccaagcccaaatcaccgacaaaaccggcggcg
cggaaaaaagtcagcaagtga
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