Pseudomonas umsongensis: HGP31_17645
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Entry
HGP31_17645 CDS
T06842
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pum
Pseudomonas umsongensis
Pathway
pum02025
Biofilm formation - Pseudomonas aeruginosa
pum03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HGP31_17645 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HGP31_17645 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pum02044
]
HGP31_17645 (tssH)
Secretion system [BR:
pum02044
]
Type VI secretion system
Imp/Vas secretion system core components
HGP31_17645 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
Clp_N
AAA_22
AAA_16
NBD_SMAX1
nSTAND3
Zeta_toxin
bpMoxR
AAA_7
AAA_25
TniB
nSTAND6
Sigma54_activat
NACHT
ATPase_2
AAA_24
SRP54
Hpr_kinase_C
DUF815
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QJC80049
UniProt:
A0AAE6ZXS7
LinkDB
All DBs
Position
complement(3934383..3937046)
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AA seq
887 aa
AA seq
DB search
MVQNASRLLRRLNPYCAQALSAAATLCQSRAHGYISIEHWLLKLFEQGEGDLTLIARRYE
WDLDALWRGLLEHLDKLQRSVHGKPQLCGKLQQLIRSAWLRASLDSQEQLRSAHLLGALL
ESPELLACDAAWPLFSISETQLQHLFVLLDQHSEERPQVQQEAAIDQAPVSIDGLATPSS
ASGNHDALQAVLDRFTQDVTAKAREGQIDPVFGRDDEIRQVIDILSRRRKNNPLLVGEPG
VGKTALVEGLALRIVEGNVSDSLKPVSVRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQS
ANPVLLFIDEAHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAAL
ERRFQKVKVDEPDDHDACLMLRGLKARYASHHGVHIQDAAVQAAVALSRRYLTGRQLPDK
AVDLLDTASARVRMSLDCEPQALVRLKAGLAALGLERQALAEDAQLGDCSVDERLALIDA
QRVDLQDQHTALVRQYRDELDLTRQLLDARQADPLQISLCTGLQQQLAKVQGSQPLLSLD
VNPRSVAEVIADWTGVPLGSLLKDEQASLLELEQQLSDRVVGQNHALGALAQRLRAAKTG
LTEEQAPLGVFLLVGTSGVGKTETALALADCLFGGEQSLITLNLSEYQEAHTVSQLKGSP
PGYVGYGQGGVLTEAVRRRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGREIDFR
NTVILMTSNLGSDELQACVQQYPEAPDSTLQELLRPLLREHFQPALLARFQTLIYRPLQV
EALERIVAQKLAKVAKRLQRHYGLSCQIENALNQALVAACLLPDTGARNIDSLLNQQILP
VLSLQLLQRQAAHQQTRGVTLGYSDDEGITLRFIDSREAMPSVAKEA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaatgcctcccgcttgcttcgccgtctcaatccctactgtgcccaggcgctg
agcgcggcggcgaccctgtgccaaagtcgcgcccatggctacatcagtatcgagcactgg
ttgcttaaattattcgaacagggcgagggcgacctgacgctcattgcccgtcgctacgaa
tgggatctggacgcgctctggcgcggactgcttgaacacctggacaaactacagcgtagc
gtgcacggcaagccgcagctgtgtggcaaattgcagcaattgatcaggagcgcctggctg
cgcgcatcgctggacagccaggaacagctgcgctcggcccacttgctcggcgcgttgctg
gagtcacccgagctgctggcttgtgacgcagcctggccactgttcagcatcagcgaaacc
caactgcagcatttgttcgtgctgctcgatcaacattccgaagagcgcccccaagtgcag
caagaggctgccattgatcaggcaccggtctcgattgatgggctggcgacgccttcatcc
gcttccggcaaccacgatgccttgcaggccgtgctggacaggttcacccaggacgtcacc
gcaaaggcccgggaagggcagatcgatccggtgttcggccgtgacgatgagatccgccag
gtcatcgatatcctcagtcgtcggcgcaagaacaatccgctgttggttggcgagcccggc
gtcggcaagaccgcactggtcgaaggtttggcgctgcgcatcgtcgagggcaacgtttcg
gacagcctcaaaccggtcagcgtacgcactctcgacctggggttgctgcaagcgggtgcc
ggggtcaagggtgagttcgagcagcgcctgaaaaacgtcatcgatgccgtgcagcaatcg
gcaaacccagtgcttttgttcatcgatgaagcccataccctgatcggcgccggcaaccag
gcgggcggtgccgacgcggcgaacctgctcaagcccgcactcgcccggggcgaattgcgc
actattgccgccactacctggagcgaatacaagcagtactttgagcgcgatgccgccctg
gaacgacgcttccagaaggtcaaggtcgacgagccggatgaccacgatgcctgtctcatg
ctgcgtggcttgaaggcgcgttacgccagccatcatggcgtgcacattcaggatgcggcg
gtacaggccgcggtcgcgctttcgcggcgttacctgaccggtcgacaactgcccgacaag
gccgtcgacctgctcgacaccgccagtgcccgggtgcgcatgagccttgattgcgagccc
caggcactggtcaggctcaaggccgggctggcggccctggggcttgaacgacaagcactg
gcagaggatgcacaactcggcgattgcagcgttgacgaacgccttgccttgatcgatgcg
caacgggtcgacctgcaagaccagcacactgcgctggtgcgtcagtatcgcgacgaactc
gacctgacccgccaactgcttgatgcacgtcaggctgaccccctgcagatctcgctttgt
actggactgcaacagcagcttgcgaaggtgcagggcagccagccgttgctctcgctggac
gtcaacccacgcagcgtggccgaagtgatcgctgactggaccggcgtgccgctgggcagt
ctgctcaaggacgaacaggccagcctgcttgaactggagcaacaattgagtgaccgcgtc
gtcggccagaatcacgctctcggcgccctggcccagcgcctgcgcgcggccaagaccggc
ctgaccgaagagcaggctcccttgggcgtgttcctgctggtaggcaccagcggcgttggc
aagacagaaaccgccctggcgctggccgactgtctgttcggtggcgaacagtcgctgatt
accctgaacctctccgagtaccaggaggcccataccgtcagccaactcaagggctcgcca
ccgggttatgtaggttacggccaaggtggcgtactcaccgaagcggtacgccggcgcccc
tacagcgtggtattgctcgacgaagtggagaaagctcaccgcgacgtgctcaacctgttc
taccaggtcttcgatcgcggtttcatgcgtgatggtgaagggcgcgaaatcgactttcgc
aacaccgtcatcctcatgacttccaaccttggcagcgatgaactgcaagcctgcgtgcag
caatatcctgaagcacctgacagcaccctgcaggagttgctgcggccactgttgcgcgag
cacttccagccggcattgctcgcgcgcttccagaccctgatctaccgccctctgcaagtc
gaagcattggaacgcatcgtcgcgcaaaaacttgccaaggtcgccaaacgcctgcaacgc
cactacggcctcagctgccagatcgaaaacgcgctcaaccaagccctggtcgccgcctgc
ctgctgcccgataccggcgcgcgcaacatcgacagcttgctcaatcagcagattttgcca
gtgcttagcctgcagcttttgcagcggcaggcggcccatcagcaaacccggggagtgacc
ttgggttacagcgacgatgaaggcatcacgctgcggtttatcgattcccgggaagcgatg
ccaagcgtcgccaaggaggcctga
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