Pseudomonas umsongensis: HGP31_20215
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Entry
HGP31_20215 CDS
T06842
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00020
Citrate cycle (TCA cycle)
pum00480
Glutathione metabolism
pum00720
Other carbon fixation pathways
pum01100
Metabolic pathways
pum01110
Biosynthesis of secondary metabolites
pum01120
Microbial metabolism in diverse environments
pum01200
Carbon metabolism
pum01210
2-Oxocarboxylic acid metabolism
pum01230
Biosynthesis of amino acids
pum04146
Peroxisome
Module
pum_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pum_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HGP31_20215 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
HGP31_20215 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HGP31_20215 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HGP31_20215 (icd)
Enzymes [BR:
pum01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
HGP31_20215 (icd)
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Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
QJC80535
UniProt:
A0AAE7DG45
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All DBs
Position
complement(4480548..4481804)
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AA seq
418 aa
AA seq
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MGYKKIQVPAVGDKITVNADHSLNVPDNPIIPFIEGDGIGVDVSPVMIKVVDAAVEKAYG
GKRKISWMEVYAGEKATQVYDQDTWLPQETLDAVKDYVVSIKGPLTTPVGGGIRSLNVAL
RQQLDLYVCLRPVVWFEGVPSPVKKPGDVDMVIFRENSEDIYAGIEWKAGSPEATKVIKF
LKEEMGVTKIRFDQDCGIGIKPVSKEGTKRLVRKALQYVVDNDRKSLTIVHKGNIMKFTE
GAFKDWGYEVAKEEFGAELLDGGPWMKFKNPKTGREVVVKDAIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDQVNPGSVIL
SAEMMLRHLGWTEAADLIIKGTNGAIKAKTVTYDFERLMEGATLVSSSGFGEALIKHM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggttacaagaagattcaggttccagccgtcggcgacaaaatcaccgtcaatgcagac
cattctctcaatgttcctgataatccgatcatcccgttcattgaaggcgacggcattggc
gttgacgtcagccccgtcatgatcaaggttgtcgatgctgccgtggaaaaggcctacggg
ggcaagcgcaagatttcctggatggaagtctatgctggcgaaaaggctacacaggtctac
gaccaggacacctggctgccccaggaaaccctggacgccgtgaaagactacgtcgtttcc
atcaagggcccgctgaccacgccggtcggtgggggtatccgctccctcaacgttgccctg
cgccagcagctggacctgtatgtgtgcctgcggccagtggtgtggttcgaaggtgtgcca
agcccggtgaaaaaacctggcgacgtcgacatggtgatcttccgcgagaactccgaagac
atctacgccggtatcgagtggaaggccggctcgcccgaagccaccaaggtcatcaagttc
ctgaaagaagaaatgggcgtcaccaagatccgtttcgaccaggactgcggcatcggcatc
aagccggtttcgaaagaaggcaccaagcgcctggtgcgcaaggccctgcagtacgtggtg
gacaacgaccgcaagtcgctgaccatcgtgcacaagggcaacatcatgaaattcaccgaa
ggcgccttcaaggactggggctatgaggtggcgaaggaagaattcggcgccgagctgctc
gatggcggcccgtggatgaaattcaagaacccgaaaaccggccgcgaagtcgtggtcaag
gacgccattgccgacgccatgctccagcagatcctgctgcgtccagccgaatacgatgtg
attgccacgctgaacctcaacggtgactacctctccgacgccctggcggcggaagtgggc
ggtatcggtatcgcgccaggcgcgaacctgtccgataccgtggccatgttcgaagccacc
cacggtaccgcgccgaaatatgccggcaaggaccaggtcaacccgggttcggtgatcctt
tcggccgaaatgatgctgcgtcacctgggctggaccgaggcggcggacctgatcatcaag
ggcaccaacggtgcgatcaaggccaagaccgtgacctatgacttcgagcgcctgatggaa
ggtgcgacgctggtttcgtcttccgggttcggtgaagcgctgatcaagcacatgtaa
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