Pseudomonas umsongensis: HGP31_21580
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Entry
HGP31_21580 CDS
T06842
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pum03016
]
HGP31_21580 (truA)
Enzymes [BR:
pum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HGP31_21580 (truA)
Transfer RNA biogenesis [BR:
pum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HGP31_21580 (truA)
Prokaryotic type
HGP31_21580 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QJC82561
UniProt:
A0AAE7A4P7
LinkDB
All DBs
Position
complement(4780720..4781544)
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AA seq
274 aa
AA seq
DB search
MAADGFFRIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLLCAGRTDAG
VHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDVERMAEAARYLVGTHDFSAFRAGQCQAKSPIKELHHLR
VTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWMKEVLESRIRRSGGVTAHP
FGLYLVQVEYRDEFQLPERYIGPHFLTGFSELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacggctttttccggatcgcgttgggcgttgaatacaagggctcgcgttat
cgtggctggcagcgccaggcctccggcgtgctcacggtgcaggaaaccctcgaaaacgcc
ttgtcgaaggtggccgactctcccgtttcgctgctgtgcgccgggcgtaccgatgccggc
gtgcatgcgtgtggccaagtggtgcacttcgatacgcaagtcgagcgttcgatgaaagcc
tgggtcatgggcgccaatatcaatttgccgcacgatgtcagcgtcagttgggccaaggtc
atgccggcgcattttcatgcccggttcaaggccattgcccggcgatatcggtatgtgatc
tacaacgaccagatccgtccggcgcacctgaacgaggaaatcacctggaaccaccgtcca
ctggacgtcgagcgcatggccgaagcggcccggtacctggtgggcacgcacgatttcagc
gctttccgagccggccagtgccaggccaagtcgccgatcaaagagctgcatcacctgcga
gtcacgcgccacggcaagatgatcgtgctggatattcgcgccagcgccttcctgcaccac
atggtgcgcaacatcgccggcgtgctgatgaccatcggtgctggcgagcgtccggtggag
tggatgaaggaagtgctggagagccggattcgccgttccggcggggtgacggcgcatccg
ttcggcctgtatctggtgcaggtcgagtaccgcgacgagttccagttgcccgagcgttac
atcggcccacatttccttaccggtttcagcgaacttgacggctga
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