Pseudomonas umsongensis: HGP31_23660
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Entry
HGP31_23660 CDS
T06842
Name
(GenBank) hypothetical protein
Organism
pum
Pseudomonas umsongensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
NEL
ToxA_N
LRR_14
LRR_8
LRR_4
LRR_R13L1-DRL21
LRR_NXF1-5
Motif
Other DBs
NCBI-ProteinID:
QJC81158
UniProt:
A0AAE6ZZ12
LinkDB
All DBs
Position
complement(5264570..5269387)
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AA seq
1605 aa
AA seq
DB search
MQATTSKPAPVAVPLTSAQRLEALLEHTGDLDKAQVLQASIAPWLATADLSVVQALKAAF
EQSFVTQGKVTEALKKLKPLDEFCKEQLTAFLKGKWTVDFDVERDMLDITKTLYTSTGVL
PVFGSAGRVTTTSRSLLQAAMENFTAKEATSGGFSADSVIRINEQAQSGAEIIPVKFAAL
SRELDLGARYQRHIDQALALPPRPANDAPADDRPSIADIRRLKMLDMRVALHMASLKKDI
TAAAYTMLLSVIDQDLPAAQASGVLFDGGPVQWQGLMIHDACICGALVFSKVSIDTEPKA
RCVVYMPNEPRRPLYEYASLDDFKVYLTLHLQSKSYRKSFAEQYLHGQDKTGFFTEFDKD
KTLGTLVAAPGDTCLGDFFFSTFVSTTQKNARMLAVPTADVDEQEREKNLQALLDGGLLL
LNAAAFFVPVIGQFMLATAVVDIISEVYEGVVEWTHGERTAALSHLLSVVENVAQLAAFA
VGGKIIATTIGKGVKEQGAFFDGFEAVTCADGRARLWKPNLDTYEQTTTLPIGAQPDVQG
LYRHAGQTSIVIEGVPYRATRNAAGSAWTLNHPVRTDAFAPAVERNVEGGWRHVHEHAHE
WHDGAYALGRTDPRLSDLGSDLEAIADIIDMTPDTLHQLHQSNLKLPQRLKDCVERFRID
RRITAMVTAMEEGESANKDFIQEQLHTLPRLPGWPAERFIEVRDEADLVVSRFPETGPHE
DENVNSVLVYQSDLESGKLLDKVIGGLYPAEVQGIIASTTTESKSQLLAKKIATSLKSNR
QPLFDWLYKTWDGTATGDVATLGEHAADLPVRVRQELLDNASGNDRSFLRDRKILGMDLA
GQVSEAQALLRQDRALTGLHLPHLANADTNRLTLWLMERVHGWDESCRLEVRQGRATGTL
LDSVGAVDAESLGIIVKTPTGYQVTQTNGNFSSTLMSDTLVTSILDALPATQRTRMGLTG
DGVQDVRALRSRLSKAGAGDPARTGRVLRGERSDTPKHLAACVLADPPAAGTYARGLIRK
VKKLYPLFSDAQASVFLDSAGTTQLQRVNRIKALELQLKKLLDVLHAWRDDEVAMKKLPG
QLNDIRVSRRQVANAIERCWRRIAWSTQGSTTLTLERNFVGPLPTLTEQDVAHVRSLSVK
DMQAGDELAYFLKPFKKLVTLKLDRNKLTRLPEVLSHMPDLRHLSLEDNQIQLTEHTLRK
LADMRNLRALGLNGNRLGATIDISKMLNLKELLLRDTHATELPVGLSRLPYLDFVDLRGN
LIRELPELLFQLPQRFALAINLRHNPVSASSRTRLAAYHVRTGIGMGLLPNDTAVLNDQR
ARDLWMPKLVEETYASRNRAWLALKHEPGSKAFFELLAEVGNSADSRYVNEDMTRRVWSV
IEATQAHSALRTQLLSMAVKAHCADDAATIFSNLEVAVEIDRVVRLSANAHDQAARLLRL
GRSLFRLDYLSRIAREKSQVNPALDAVEVELAYRTGLADRLDLVGQPQHMRYASLSGVKA
NDLELAYNKVLAAEISPELSTYITGRTFWSDFLRQQHGKQFTDLTAPFHVRMETAFENEA
TLGADYRATVDGIADELHNAEAALLKRLTEAAMEADESRTCFALD
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctacgacttccaaacccgcccccgtcgcggtgccactgacatcggcacaacgt
ctcgaagccttgttggaacacacgggcgacctggacaaggcgcaagtgctgcaagcgtct
atcgccccttggttggcaaccgcggatttgagcgtggtgcaggctttgaaggcggcgttc
gagcagtcttttgttacccagggcaaggtcacggaggcgctcaaaaagctcaagcctctg
gacgaattctgcaaagagcaactgaccgcattcctcaagggtaaatggacggtcgatttc
gacgtcgagcgggacatgctggacattacgaaaacactgtacacgtccacaggcgtgctc
cccgtcttcggatccgctggtcgagtaaccaccacatcacgcagcttgcttcaggccgcc
atggaaaactttacggctaaggaagccacgagcggcggtttttcagcggactcggttata
cgcatcaatgaacaagcccaatcaggcgctgaaatcatccctgtaaaattcgccgccctg
tcgcgtgagctcgacctgggcgcccgctatcagcgccatattgaccaggctttggccttg
ccgcccagacccgccaatgatgcgcctgccgatgatcggcccagcatcgcggatatccgg
cggctgaagatgctggatatgcgcgtcgccctgcacatggcctccctgaaaaaggacatc
actgccgctgcctacacgatgctgctgagtgtgatcgatcaggatctcccggcagctcaa
gccagcggcgtgctattcgatggtgggcctgtgcagtggcagggcttgatgattcatgac
gcctgcatctgtggggcactggtcttcagcaaagtctccatcgataccgagccgaaggcc
cggtgtgtggtttacatgccgaacgaaccccgacgaccgctgtatgaatacgcttcgctg
gatgacttcaaggtctacctgaccctccacttgcaaagcaaaagctacagaaagtctttc
gccgagcagtacctgcatggccaggataaaaccggtttttttaccgagtttgacaaggat
aagaccctgggcacactcgttgccgcgcctggcgacacttgccttggtgattttttcttc
agcacttttgtcagtacgactcaaaaaaatgcacgaatgcttgcggtgccgactgcagac
gtcgatgagcaagagcgggaaaaaaaccttcaggcattgctcgatggtggtcttctgctg
ttgaacgcagccgctttttttgtaccggtgatcggccagttcatgctggctacggctgtc
gtcgacatcatcagtgaagtgtatgaaggcgtggttgagtggacgcacggagagcggacc
gctgctttgtcccatttgctgagcgttgtggaaaacgtcgcgcagttggcagcgtttgcc
gtcggcgggaaaattatcgcgaccactatcggtaagggcgtaaaggagcagggagcattc
ttcgacggtttcgaggccgtcacttgcgctgatggtcgagccagattgtggaagcccaac
ctcgacacctatgaacagaccacgactctgccaatcggcgcgcaacctgatgtgcaaggc
ctctaccggcatgccgggcagacgtcgatcgtcatcgagggagttccttatcgagccacc
cgcaacgccgccggatcggcatggacgctcaatcatcctgtgcgcaccgacgcattcgcg
cctgccgtcgagcgaaatgtggaagggggctggcggcatgttcatgagcacgcgcacgag
tggcacgacggtgcttatgcattggggcgcacggatccgcgcctgagtgatctgggcagt
gatctggaagcgattgccgacatcatcgacatgacgcctgacacgttgcaccagcttcat
caaagcaacctcaagttaccgcagcggctgaaggactgtgtcgagcgcttcaggattgac
cggcgcatcactgcgatggtcacggcaatggaagagggagagagcgcaaacaaggacttc
atccaggagcaactgcatacactgccgaggttgccaggctggccggcggaacgcttcatc
gaagtgcgcgacgaggcggacctggtagtgtcccgcttccccgagacagggccacacgag
gatgaaaacgtcaacagcgtgcttgtttatcagtcggatctggagtctgggaaactgctc
gacaaagtcatcggtggtctctatccggcagaggtgcagggcatcatcgcaagcacaacc
acggaatcgaaatcgcagctgttggcgaagaagatcgcgacgagcctcaagagtaatcgc
caaccgctgtttgactggctctataaaacctgggacggcaccgccaccggtgacgttgcg
acgctgggtgaacacgccgcagaccttcccgttcgcgtgcgccaggaattgctggataac
gcctctggcaacgatcgcagctttctgcgtgaccgcaagatcctcggcatggatctcgcg
gggcaggtcagcgaggcacaggcactgctcaggcaggaccgtgcgctcaccgggttacac
ctgccgcatttggctaatgccgataccaacagactgacgctctggctgatggaaagggtg
cacggctgggatgaaagctgtcggcttgaagtgcgacaggggcgagcaaccggcaccttg
ctggacagcgtcggtgcagtggatgcagagtcgctcggtatcattgtaaagacgcccacc
ggctaccaggtcactcaaaccaatggcaatttttcctccacgttgatgagcgacacgctg
gtcacgtcgatacttgacgctttgccagccacccagcgcactcgcatggggctcacgggc
gatggtgtgcaggacgtccgtgctcttcgttcaagactgtcgaaggccggcgccggcgat
ccggcgcgtaccgggcgcgtgttacggggagagcgcagtgatactcccaaacacctggct
gcctgtgtactggcagatcctcccgctgcgggcacttatgcaaggggcttgattcgtaaa
gtcaaaaagctttatccactgttctccgatgcccaggcttcggtgtttctcgacagcgcc
ggcactacccagctgcagcgggtgaatcgaatcaaggcgctggagctgcaactgaaaaaa
ctgctcgatgtgctgcacgcctggcgtgacgatgaagtggcaatgaagaaactgccgggg
cagctcaatgacatccgtgtcagccgtcgacaggtggccaatgccatcgaacgatgctgg
cgccggatagcatggtccactcagggttctacaacgctcacgctggagcgcaactttgta
ggcccattgccgacgctgaccgagcaagatgtcgcccatgtgcgcagtctttccgtcaag
gacatgcaggctggcgatgagttggcgtacttcctcaagccttttaaaaagctggtcact
ctgaaactggaccgcaataagctcacacgattgcctgaagtgctgtcgcacatgcccgat
ctcaggcatttgagcctggaggataatcagatacagctgaccgaacacaccttgcgcaaa
ctggcggacatgcgcaatttgcgtgcgttggggctcaatggcaatcgcctgggggccacg
attgacatcagcaaaatgctgaacctgaaagagctgttactgcgcgatactcatgcgacg
gaattgcctgtcggactttcccgtttgccgtatctggactttgtggacctgcggggaaac
ctgattcgggaactgccggagttgctgtttcaactccctcagcgattcgccctggcgatc
aacttgcgccataaccccgtatccgcgtctagccgaacgaggcttgcggcctatcatgtt
cgtacgggcatcgggatggggctgctgccaaatgataccgctgtgctcaatgatcaaagg
gctcgagacctgtggatgcccaaactggttgaagagacctatgccagtcgtaatcgtgct
tggctggcgttgaagcacgaacccggatcgaaagcattctttgagttgctggcagaagtt
ggaaattcggccgatagccgttatgtgaatgaagacatgacccggcgggtctggagtgtc
attgaggcgacccaggctcactcggcattacgtactcaattgctgtcaatggcagtcaag
gcccattgcgctgatgacgcggcgacgatcttcagtaatctcgaggtcgccgtcgaaatt
gacagggtggttcggctgtccgccaacgcccatgatcaggccgctcggttattgagactc
gggcgaagtctgtttcgcctggattacctttccagaattgctcgggaaaagtcccaggtc
aatccagcactcgatgcggtggaagtggagttggcttatcgcaccggcctggccgacagg
cttgacctggtcggccagccccagcacatgcgttatgcatcgctcagtggcgtcaaggca
aatgacctggagttggcctacaacaaagtccttgccgcggaaatttcacctgagctatcg
acctatatcactggccgtacgttctggagcgactttttgcgacagcaacatggcaaacaa
ttcaccgacctgaccgccccctttcacgtgcggatggaaacggcctttgaaaacgaggca
acgctgggtgcggattatcgcgccacagtcgacggcatcgccgatgagttgcacaacgcc
gaggccgctttgttgaagcgtctgaccgaggcggccatggaagctgacgagtcaaggact
tgctttgcgctggattga
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