Pseudomonas umsongensis: HGP31_24010
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Entry
HGP31_24010 CDS
T06842
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00540
Lipopolysaccharide biosynthesis
pum01100
Metabolic pathways
pum01250
Biosynthesis of nucleotide sugars
Module
pum_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HGP31_24010 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pum01005
]
HGP31_24010 (kdsB)
Enzymes [BR:
pum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HGP31_24010 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pum01005
]
Lipid A
HGP31_24010 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
adh_short_C2
DUF2064
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QJC81227
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Position
complement(5341542..5342306)
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AA seq
254 aa
AA seq
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MTSAFTVVIPARYASTRLPGKPLLSIAGKPMIQHVWEQACKSSAERVVVATDDARIAQAC
EGFGAEVVMTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAVNLAA
HTEARMATLAEPIEDVESLFNSNVVKVVSDLNGLALTFSRATLPWARDTFAKSLEQMPEG
VPYRRHIGIYAYRAGFLHDFVSWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVD
TVEDLERVRRLLEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagcctttaccgttgttattcctgcgcgctacgcctccacccgcttgccgggc
aagccgctgctgtcgatcgctggcaagccgatgatccagcacgtttgggaacaggcgtgc
aaaagtagcgcagagcgcgtggtggttgccacggacgatgcgcgcatcgcccaggcctgt
gaaggttttggtgccgaagtggtgatgactcgcgaagaccacaactccggaaccgatcgc
ctggctgaagtcgcggcaaagctgggcctggcgccagacgcgatcgtggttaacgtccag
ggtgacgagccgttgataccgccgagtgtcattgaccaggtggccgtcaacctggctgcc
cacaccgaagcgcgcatggccacgttggccgagccgatcgaagacgtggagagcctgttc
aactccaacgtggtcaaggtcgtcagtgacctcaatggcctggcgctgaccttcagtcgc
gccacgttgccgtgggcacgggacacgttcgccaagagcctcgagcaaatgcccgaaggc
gtgccgtatcgccgccacatcggcatctatgcctaccgcgccggtttcctgcatgacttc
gtcagctggggcccttgctggctggaaaacaccgagtgcctggaacaactgcgtgccttg
tggcacggggtacggatccacgtcgccgatgcactgatcgcgccgcctgccggcgtcgat
accgttgaagaccttgagcgcgttcgtcgcctgctggaggcctga
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