Pseudomonas umsongensis: HGP31_24985
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Entry
HGP31_24985 CDS
T06842
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pum
Pseudomonas umsongensis
Pathway
pum01501
beta-Lactam resistance
pum02020
Two-component system
Module
pum_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HGP31_24985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HGP31_24985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pum02000
]
HGP31_24985
01504 Antimicrobial resistance genes [BR:
pum01504
]
HGP31_24985
Transporters [BR:
pum02000
]
Other transporters
Pores ion channels [TC:
1
]
HGP31_24985
Antimicrobial resistance genes [BR:
pum01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
HGP31_24985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QJC81391
UniProt:
A0AAE7A153
LinkDB
All DBs
Position
5535167..5536495
Genome browser
AA seq
442 aa
AA seq
DB search
MRVMKWSMIALAVAAGTSQFAVASSQDESKGFFGDQSLKLKTRFEYMNRDYKNGASNPSS
GTAGYRQDSGLSQLLTYESGFTQGTVGFGLDAMAMGAVKLDGGSGKRGNGLFANDSDGNP
EKSQGKLGGAVKLRLSDTVLKYGQQFVASPVFATDDSRMLPEVATGTLITSKEIKGLEVS
AGRFTALSKQTGMARDSIGGLPDEDGFHSKGLSDGINIFGASYAFTDNFTAAVAASDAEE
YFKKYYVNMNLTVPINDEQSLNFDLNGYKTKGDKRGDLVDAIGDGTLGVDNNLWSLAAAY
SLGAHKFTLAYQQSSGDNAYYYGVDGNSTIFVSNSIQISDFVGREEKSYQARYDLNMAQY
GVPGLSFMTRYVMGDNIKTNGLGEGKENEWNLESKYVVQEGPAKDLSFRARFANYRSNGA
YSGYSSDVYDTRLIIEYPLSIL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggctgttgcagctggtacctcgcagttc
gcagtggcgtcgtcccaggacgagtccaagggtttcttcggcgaccaaagcctgaaactc
aaaacccgttttgagtacatgaaccgcgactacaagaacggcgcgagcaacccatcgagc
ggcaccgccggctatcgtcaggactccggtctgagccagttgctcacttacgagtcgggc
ttcactcaaggtactgttggtttcggcctcgacgccatggccatgggcgcagtgaaactg
gacggcggttcaggcaagcgtggtaacggcctgttcgctaacgacagcgacggcaacccg
gaaaaatcccagggcaagctgggcggtgcagtgaaactgcgcctgtccgacaccgtcctg
aaatacggccagcagttcgttgccagcccagtgttcgcgactgacgacagccgtatgctg
ccggaagtggctaccggtaccctgatcacttccaaggaaatcaaaggcctggaagtaagc
gctggtcgcttcaccgcgctgagcaagcaaaccggtatggcccgtgacagcatcggcggc
ctgccagatgaagacggtttccactccaagggcctgagcgacggcatcaacatcttcggt
gccagctacgccttcaccgataacttcaccgctgccgtggctgcgtcggatgctgaagag
tacttcaagaagtactacgtcaacatgaacctgaccgtgccgatcaacgacgaacagtcg
ctgaacttcgacctgaacggttacaaaaccaagggcgacaagcgtggcgacctggttgac
gcaatcggcgacggcaccctgggtgtggacaacaacctgtggtccctggcagctgcctat
agcctgggcgctcacaaattcaccctggcctaccagcagtcgagcggcgacaacgcttac
tactacggcgttgacggcaacagcaccatcttcgtatccaactccattcagatctccgac
ttcgtgggccgcgaggagaaatcctaccaagctcgctacgacctgaacatggcgcaatac
ggcgttcctggcctgagcttcatgacccgttacgtaatgggtgacaacatcaagaccaac
ggtctgggtgaaggtaaggaaaacgagtggaacctggagtccaagtacgtcgtacaggaa
ggtccagcaaaagacctgtcgttccgtgcacgtttcgccaactaccgctcgaacggcgcg
tacagcggctactcgtctgacgtctacgacacccgcctgatcatcgagtacccactgagc
atcctgtaa
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