Pseudomonas umsongensis: HGP31_25040
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Entry
HGP31_25040 CDS
T06842
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_25040
DNA repair and recombination proteins [BR:
pum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
HGP31_25040
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
TrwB_AAD_bind
AAA_30
AAA_10
T2SSE
nSTAND_NTPase5
CbiA
AAA_7
AAA_6
AAA_19
nSTAND3
SRP54
P-loop_TraG
AAA_28
Hydrolase
AAA_5
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QJC81402
UniProt:
A0AAE7DFZ0
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Position
complement(5548623..5550110)
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AA seq
495 aa
AA seq
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MPDSLQLVIGADLAGQPIAQAMRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLNHKPAAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDHPELLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDALSVLTEL
GIGEALVGTLQDKGTPEMVQRVLVAPPQSRIGPLTETERTLLIAGSPCKGRYDKPIDRES
AYEILMGRKGLAPEPEAAPAKPTAQEPSFTEQAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattcattgcaacttgttatcggcgccgatctcgcgggccagccgatcgcccag
gccatgcgcctggcgaaccgtcacggattgatcgcaggcgctaccgggaccggcaagacc
gtcacgttgcaacgtctggccgaagccttcagcgatgccggcgtggcggtctttgccgcc
gacatcaagggtgacctgtgcggcctgggcgctgccggcaacccccagggcaagatcgcc
gagcgtattgccggcatgccgtggctgaaccacaagcctgcggcctatccggtgaccttg
tgggacattcacggtcagtccggtcatcctttacgcacgacgttgagcgaaatggggccg
ttgctcctcggcagcctgctggaattgaccgacagccagcagtcggcgctgtatgccgcg
ttcaaggtggccgaccgcgaaggcttgttgctgctggatctgaaggatctcaaggcgctg
ctcaatcacctcaaggaccaccccgaactgctgggggatgacgcggcgctgatgaccacc
ggctccagccaggccctgctacgacgcctggcaaccctggaacagcagggcgctgaggcg
ctgtttggtgagccggcgctgcaactggaggatattctgcaaccgaccgccgatggccgc
gggcgcatccatctgctcgatgccagtcgcctggtgcatgaagcccccaaggtctacgcg
acgttcctgttgtggctgctggcggaactgttcgagcaactgccggaacgtggcgatgcg
gacaaaccgttgctggcgctgtttttcgacgaggcgcatttgttgttcgccggcacgccc
aaggcgctgcaggatcgactggaacaagtggtgcggctgattcgatccaaaggggtgggg
gtgtatttcgtcacccagtcaccgggcgacttgcccgatgacgtgttggcacagctgggc
ctgcgcatccagcacggcttgcgcgcgttcaccgccaaggagcagaaatcactgcgagcg
gtggccgatggcttccgaccgaatccggcgttcgacgccctgtcggtgctgaccgagctg
ggtatcggcgaggcactggtgggcaccttgcaggacaagggcacaccggaaatggtccag
cgcgtgctggtggctccaccgcaatcacgcatcgggccgctgacggaaacggagcgcacg
ctgctgatagccggttcgccgtgcaaggggcggtatgacaagccgatcgatcgcgaatca
gcctatgaaatactgatgggccgcaagggactggcccccgaacctgaggctgcgccagca
aaaccgacggcgcaggagccgagcttcaccgagcaggccggagagtttctcggcacggcg
gcgggacaggcactgaaatcagcgatgcgacaggcggctaatcagctgggacggcaattg
gtgcgcgggttgatggggtcattgttgggcggcagcaaacgccgctaa
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