KEGG   Pseudomonas umsongensis: HGP31_25040
Entry
HGP31_25040       CDS       T06842                                 
Name
(GenBank) DUF853 family protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
pum  Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:pum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pum03400]
    HGP31_25040
DNA repair and recombination proteins [BR:pum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     HGP31_25040
SSDB
Motif
Pfam: HerA_C DUF87 FtsK_SpoIIIE AAA_22 ResIII TrwB_AAD_bind AAA_30 AAA_10 T2SSE nSTAND_NTPase5 CbiA AAA_7 AAA_6 AAA_19 nSTAND3 SRP54 P-loop_TraG AAA_28 Hydrolase AAA_5 Zeta_toxin
Other DBs
NCBI-ProteinID: QJC81402
UniProt: A0AAE7DFZ0
LinkDB
Position
complement(5548623..5550110)
AA seq 495 aa
MPDSLQLVIGADLAGQPIAQAMRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLNHKPAAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDHPELLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDALSVLTEL
GIGEALVGTLQDKGTPEMVQRVLVAPPQSRIGPLTETERTLLIAGSPCKGRYDKPIDRES
AYEILMGRKGLAPEPEAAPAKPTAQEPSFTEQAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgcctgattcattgcaacttgttatcggcgccgatctcgcgggccagccgatcgcccag
gccatgcgcctggcgaaccgtcacggattgatcgcaggcgctaccgggaccggcaagacc
gtcacgttgcaacgtctggccgaagccttcagcgatgccggcgtggcggtctttgccgcc
gacatcaagggtgacctgtgcggcctgggcgctgccggcaacccccagggcaagatcgcc
gagcgtattgccggcatgccgtggctgaaccacaagcctgcggcctatccggtgaccttg
tgggacattcacggtcagtccggtcatcctttacgcacgacgttgagcgaaatggggccg
ttgctcctcggcagcctgctggaattgaccgacagccagcagtcggcgctgtatgccgcg
ttcaaggtggccgaccgcgaaggcttgttgctgctggatctgaaggatctcaaggcgctg
ctcaatcacctcaaggaccaccccgaactgctgggggatgacgcggcgctgatgaccacc
ggctccagccaggccctgctacgacgcctggcaaccctggaacagcagggcgctgaggcg
ctgtttggtgagccggcgctgcaactggaggatattctgcaaccgaccgccgatggccgc
gggcgcatccatctgctcgatgccagtcgcctggtgcatgaagcccccaaggtctacgcg
acgttcctgttgtggctgctggcggaactgttcgagcaactgccggaacgtggcgatgcg
gacaaaccgttgctggcgctgtttttcgacgaggcgcatttgttgttcgccggcacgccc
aaggcgctgcaggatcgactggaacaagtggtgcggctgattcgatccaaaggggtgggg
gtgtatttcgtcacccagtcaccgggcgacttgcccgatgacgtgttggcacagctgggc
ctgcgcatccagcacggcttgcgcgcgttcaccgccaaggagcagaaatcactgcgagcg
gtggccgatggcttccgaccgaatccggcgttcgacgccctgtcggtgctgaccgagctg
ggtatcggcgaggcactggtgggcaccttgcaggacaagggcacaccggaaatggtccag
cgcgtgctggtggctccaccgcaatcacgcatcgggccgctgacggaaacggagcgcacg
ctgctgatagccggttcgccgtgcaaggggcggtatgacaagccgatcgatcgcgaatca
gcctatgaaatactgatgggccgcaagggactggcccccgaacctgaggctgcgccagca
aaaccgacggcgcaggagccgagcttcaccgagcaggccggagagtttctcggcacggcg
gcgggacaggcactgaaatcagcgatgcgacaggcggctaatcagctgggacggcaattg
gtgcgcgggttgatggggtcattgttgggcggcagcaaacgccgctaa

DBGET integrated database retrieval system