Pseudomonas umsongensis: HGP31_26375
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Entry
HGP31_26375 CDS
T06842
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_26375 (phrB)
Enzymes [BR:
pum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HGP31_26375 (phrB)
DNA repair and recombination proteins [BR:
pum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HGP31_26375 (phrB)
Prokaryotic type
HGP31_26375 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QJC81652
UniProt:
A0AAE6ZYJ1
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All DBs
Position
5835642..5837087
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AA seq
481 aa
AA seq
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MQLIWLRSDLRLHDNTALSAAAARGPTVAVYLLSPEQWREHDDAPCKVDFWLRNLQALSG
ALGQLNIPLLIRHAPRWDDAPAVLLELCRQLQIDAVHLNEEYGIHETRRDAAVAQALKAE
GIEVHDYLDQLLFKPGSVLTKTGSYFQVFSQFRKVCYERLHHSLPSLVRTPLAQTALNIA
SDAIPTQVEGFDAPPESLRELWPAGEDEARRRLDSFTDIQIDYYQSERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALQSNQGEFESGKVGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRNAPEELAAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDAEGLFIK
HWLPQLSGLDKKAVHNPAHLGGLFGVAGYPAPIVDLSTSRARALAAFKNLPSRQTAGSLH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgacctgcgcctgcatgacaacaccgccctctcggcc
gcggcagcccgtggcccgaccgtggcggtgtatctattgagcccggagcaatggcgcgaa
catgatgatgccccctgcaaagtggacttctggctgcgcaacctgcaggcgttgagtggt
gcgctgggccagttgaacattcccctgctgatccgccatgccccacgctgggatgacgca
ccggcagtgctgctcgagttgtgccggcaattgcagatcgatgcggtgcatctcaacgag
gaatacggcatccacgaaacccgccgcgatgcagcggtagcccaggccctgaaagccgaa
ggcatcgaggtccatgactatctcgaccaactgctattcaagcccggcagtgtgctgacc
aaaaccggtagttactttcaggtcttcagtcagttccgcaaagtctgttatgaacgactg
catcattcactgcccagcctggtacgcacaccactggcgcaaaccgcactgaatattgcc
agcgacgccatcccgacgcaggtcgaagggttcgacgcccccccggagagcctgcgtgag
ctgtggccggccggtgaagacgaagcccggcgccgtctcgacagttttaccgacatacag
atcgactactaccagagcgagcgcgactttccggcaaaacccggcaccagccagctctcg
gcctatctggccgccggggtgatttcgccccgccagtgcctgcatgccgcgctgcaaagc
aaccagggcgagttcgaaagcggcaaggtcggcgccatcacctggatcaatgaactgctg
tggcgcgagttctacaaacacatcctggtgggctacccgcgggtttctcgtcaccgtgcc
tttcgcccggaaaccgaagccctggcgtggcgcaacgcccctgaagaactggccgcctgg
cagcagggccgcaccggtttgccgatcatcgacgcagccatgcgccaactgctggaaacc
ggctggatgcacaatcgcctgcgcatggtggtggcgatgttcctgaccaagaacctgctg
atcgactggcgcgagggcgaacgctttttcatgcgccacctgatcgacggcgacctggcc
gcgaacaacggcggctggcaatggagttcgtccaccggcaccgattcggcgccttatttc
cgtatcttcaacccgctgagccagtcggaaaaattcgacgccgaaggcttgttcatcaag
cactggctcccgcaactgtcggggctcgataaaaaggctgtgcataacccggcgcatctt
ggcggtttgttcggcgtggcaggttatccggcgccgatcgtcgacctgagcacctcccgc
gcccgcgccctggctgccttcaagaatctgccgtcgcggcagactgccgggagcctccat
gaataa
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