Pseudomonas umsongensis: HGP31_26910
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Entry
HGP31_26910 CDS
T06842
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pum
Pseudomonas umsongensis
Pathway
pum02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HGP31_26910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pum02022
]
HGP31_26910
02035 Bacterial motility proteins [BR:
pum02035
]
HGP31_26910
Two-component system [BR:
pum02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HGP31_26910
Bacterial motility proteins [BR:
pum02035
]
Pilus system
Twitching motility proteins
HGP31_26910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
Mg_chelatase
AAA_16
AAA_19
Pre_tape_measure
HTH_50
Imm5
Motif
Other DBs
NCBI-ProteinID:
QJC81742
UniProt:
A0AAE6ZYP9
LinkDB
All DBs
Position
5947634..5948965
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AA seq
443 aa
AA seq
DB search
MSPRKKVLVVDDEPDIRELLEITLGRMKLDTYSARNVGEALALLQRETFDLCLTDMRLPD
GSGLVLVQHIQQRYPQIPVAMITAYGNLDTAINALKAGAFDFLTKPVDLTRLRKLVTSAL
LLPAPGTTIDRRLLGDSPPMRNLRQQIDKLARSQAPVYISGESGSGKELVARLIHERGPR
ANQPFVPVNCGAIPTELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTLFLDEVADLPLP
MQVKLLRAIQEKAVRSVGGQQERVVDVRILCATHKDLGAEVAGERFRQDLYYRLNVIELR
VPPLRERRDDIEPLACHVLKRLAADTGQPAAKLHPNALDALKSYRFPGNVRELENMLERA
HTLCENNRIEASDLRLAEGNCSAEGGVPDLTQIDNLEAYLENVERQLLLQALEETRWNRT
AAAQRLNLSFRSMRYRLKKLGLD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacggaaaaaagttctggtcgtcgacgacgaaccggacatccgcgaactcctg
gaaatcaccctgggacggatgaaactcgacacttacagtgcccgtaacgttggcgaggcc
ttggccctgctccagcgcgagacgttcgacctgtgcctgaccgacatgcgcctgccggat
ggcagcggtcttgtgctggtgcaacacatccagcaacgctatccacagattccggtggcc
atgatcaccgcctatggcaacctcgatacggcgatcaatgcgctgaaggccggcgctttc
gacttcctgaccaagccggtggacctgacccgcttgcggaaactggtcaccagtgccttg
ctgttacccgcccctgggaccaccatcgatcgccgcttgctaggcgactcgccgcccatg
cgcaatctgcgccagcagatcgacaagctggcccgcagccaggctccggtgtacatcagt
ggcgagtccggcagtggcaaggaactggtcgcccgcctgattcatgagcgaggaccacgg
gccaaccagccctttgtcccggtcaattgcggcgcgattccgacggagctgatggaaagc
gagtttttcggccatcgaaaaggcagcttcagcggcgccatcgaggacaagcccggattg
ttccaggcggcccacggcggcaccctgtttctcgacgaagtggcagacctgcctctgccc
atgcaggtcaaactgctgcgggcgatccaggagaaagccgtacgcagcgtcggtgggcaa
caggaaagggtggttgatgtgcgcatactgtgcgccacccacaaagaccttggcgccgaa
gtcgccggcgaacgttttcgccaggatctgtactaccgcctgaacgtgatcgaactacgc
gtgccaccgttgcgcgaacgccgtgacgacatcgagccgctggcctgccatgtgctcaag
cgcctggctgcagacaccgggcagcccgcggcaaaactccaccccaatgccctcgacgcc
ctgaaaagctaccgttttccgggcaatgtgcgggagctggagaatatgctcgaacgcgct
cacaccttatgcgaaaacaaccggatcgaggccagcgacctgcgcctggccgagggcaac
tgctccgccgaagggggcgtgccggacctcacgcagatcgataacctggaggcgtacctg
gaaaacgttgagcgccaactgcttctccaggccctggaagagacccgctggaaccgcacg
gcggcggctcagcggttgaatctgtcgtttcggtcgatgcgctacaggctgaagaaatta
gggttggattga
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