KEGG   Pseudomonas umsongensis: HGP31_27150
Entry
HGP31_27150       CDS       T06842                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
pum  Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:pum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pum03400]
    HGP31_27150 (radA)
DNA repair and recombination proteins [BR:pum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HGP31_27150 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DUF7125 Lon_C AAA_16 DnaB_C AAA_22 GvpD_P-loop RecA_N nSTAND_NTPase5 SLFN-g3_helicase AAA Rad51 nSTAND3 AAA_14 NTPase_1 AAA_24 ABC_tran MCM PAXNEB
Other DBs
NCBI-ProteinID: QJC81785
UniProt: A0AAE6ZYM8
LinkDB
Position
complement(5998055..5999422)
AA seq 455 aa
MAKAKRMYGCTECGSTFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWTGQQAQIK
TLAEVSVEEVPRFSTASSELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLAKSMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPRVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEPPAGLQIIAVTRLEQALDALFE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggctcaacctttcccaagtgg
gccggacaatgtggtgagtgcggcgcctggaacacactcaccgaaaccatggtggagagc
ggcggggcagcggcacccagcggtcgcactggctggaccggtcagcaggcgcaaatcaag
accttggctgaagtcagtgtcgaggaggtcccgcgtttttccacggcttccagtgagctt
gaccgggtgctcggtggtggcctggtggatggctcggtggtgctgatcggcggtgatccc
ggaattggcaaatccaccattctgttgcaaaccttgtgcaatctcgccaagagcatgccg
gcactgtatgtcacgggtgaagagtcgcagcaacaggtggccatgcgtgcccgacgcctg
gggctgccacaggatcagctgcgggtcatgaccgaaacctgcatagaaaccatcattgcc
accgcccgggtggagaagccccgggtcatggtgatcgactcgatccagacgattttcacc
gagcaactgcaatctgcaccgggcggtgtgtcccaggttcgtgaaagtgcggcgctgttg
gtgcggtacgccaagcagagtggcaccgcgattttcctggtggggcatgtgaccaaggag
ggtgcgctggcggggccccgggtactggagcacatggtcgacaccgtgttgtattttgaa
ggcgaatcagacgggcgcctgcgcttgttgcgggcggttaaaaaccgtttcggcgcggtt
aacgaactgggcgtgttcggcatgaccgacaagggcctgaaagaagtctccaatccttcg
gctatttttctgacccgcgcgcaggaagaagtcccgggcagtgtggtcatggcgacatgg
gaaggcacacggccgatgctggtggaagtccaggcactggtagatgacagtcacctggcc
aatccacgccgggtaacgctgggcctggaccagaaccgattggcaatgttgttggccgtc
ttgcatcggcacggcggcatacccacccacgatcaggatgtatttctcaacgtggtcgga
ggggtgaaggtactggaaacggcatctgacctggcattgatggcagccgtcatgtccagt
ttgcgcaaccggccgctgccccatgatctgctggtgttcggtgaggtcggcctttccggc
gaagtgcggccggtgccaagcggtcaggagcgcctgaaggaagcggcaaagcatggcttc
aaacgtgccatcgtgcccaagggcaatgcgccgaaagagccgcctgcgggtttgcagatc
atcgcggtcacccgtctggagcaggccctcgacgccctcttcgaataa

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