Pseudomonas umsongensis: HGP31_27540
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Entry
HGP31_27540 CDS
T06842
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pum03016
]
HGP31_27540 (miaB)
Enzymes [BR:
pum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HGP31_27540 (miaB)
Transfer RNA biogenesis [BR:
pum03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HGP31_27540 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
HTH_39
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QJC81859
UniProt:
A0AAE7A0V5
LinkDB
All DBs
Position
6080469..6081794
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AA seq
441 aa
AA seq
DB search
MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARI
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIAEIIHLAEHGVREVTLLGQNVNGYRGKTHDGRLADLAELIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIQDVGFDFSYSFVYSQRPGTPAADLVDETPEELKKE
RLNALQHRLNQQGFEISRQMVGTTQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLM
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgttgggcgaacaccaggccctggaagtcacggcgcgcgctgaagac
gccgacgtgatcctgctcaacacctgctcgatccgcgagcgcgcccaggaccgtgtctat
tcccaactgggccgctggcgcgagctgaagctggccaacccggacatggtaatcgccgtc
ggcggttgcgtagccagccaggaaggcgccgccattcgcgaccgtgcgccctatgtcgac
gtggtattcggcccgcagaccttgcaccgcctgccggaaatgatcgacgccgcgcgcatc
accaagctgccgcaagtcgacgtctcgttccccgaaatcgaaaaattcgatcacttgccc
gagccacgcatcgatggcccgagcgcctacgtgtcggtgatggagggttgcagcaaatac
tgcacgttctgcgtggtgccctacacccgcggtgaagaagtgagccgcccgttcgacgac
gtgattgccgaaatcattcacctggccgaacacggcgtgcgcgaagtgacgctgctgggg
cagaacgtcaacggctatcgcggcaagacccatgacggtcgcctggcggatctggccgaa
ctgatccgcgtggtcgccgcagtcgatggcatcgaccgcatccgctacaccacctcgcac
ccgctggaattctccgacagcctgatccaggcccacgccgaagtaccggagctggtgaaa
cacctgcacctgccggtgcaatcgggttcggaccgcatcctcgcggcgatgaaacgcaac
cacacggcgctggaatacaaatccaaactgcgcaagttgcgcgctgccgtgccgggcatc
tgcatcagttcggacttcatcgttggtttccccggcgaaaccgagaaagacttcgaacaa
accatgaagctgattcaggacgtcggtttcgacttctcctattcgttcgtctacagccag
cgcccgggcactccggccgccgacctggtcgatgaaaccccggaagagctgaaaaaagag
cgcttgaacgccctgcaacatcgcctgaaccagcagggctttgaaatcagccgacaaatg
gtcggtacgactcagcggattcttgtaaccgattactccaagaaagaccctggcgagctg
caagggcgaaccgagaataaccgtatcgtcaacttccgctgcgacaatccgaccctgatc
ggccagtttgccgatgtgcacatcgacgccgcacagccgcactcgctgcggggctcgttg
atgtag
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