KEGG   Pseudomonas umsongensis: HGP31_28760
Entry
HGP31_28760       CDS       T06842                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pum  Pseudomonas umsongensis
Pathway
pum03030  DNA replication
pum03430  Mismatch repair
pum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HGP31_28760
   03430 Mismatch repair
    HGP31_28760
   03440 Homologous recombination
    HGP31_28760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pum03032]
    HGP31_28760
   03400 DNA repair and recombination proteins [BR:pum03400]
    HGP31_28760
Enzymes [BR:pum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HGP31_28760
DNA replication proteins [BR:pum03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HGP31_28760
DNA repair and recombination proteins [BR:pum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HGP31_28760
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QJC82088
UniProt: A0AAE7A0Q9
LinkDB
Position
6340839..6341546
AA seq 235 aa
MSLFSWLRPAGPSLSADLQQRLQRLPVVQGLSECSLREQRWVVLDLETTGLNMNKDRVLS
IGAVVIEDGAIDFSRQFERTLQCDELKLGPSVLIHGLGPSAIAAGSDPAEALLEFMEFVG
DSPVLAFHAPFDQHMLGRALKEHLGYKLQHPFMDVADIAPLLCPQANIREAGLDEWIDWF
KLEVFERHNASADALATAELALILFSRARQQQIHSPLNLQQRLNQWKRRQQTHSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagtcttttttcatggttgcgccccgccggcccgagcttgtccgcggacctgcaacaa
cgccttcaacgcctgcctgtggtccagggattaagtgaatgcagcctgcgcgaacagcgc
tgggtagtgctcgacctggaaaccaccgggctgaatatgaacaaggaccgggtactgtcc
atcggcgccgtggtgatcgaggatggcgcgatcgatttcagccggcagttcgagcgcacc
ttgcagtgcgacgaactcaaactcggccccagtgtgctgattcacggcttggggcccagt
gcaatcgccgccggcagtgacccggctgaggcgttgctcgagttcatggagtttgtcggc
gatagcccggtgctggcctttcatgcgcctttcgaccagcacatgctcggacgcgcattg
aaagagcacctgggctacaagttgcaacatccctttatggatgtggcggacatcgccccg
ctgctgtgtccgcaggccaatatccgcgaggccggcctggacgagtggatcgattggttc
aaactggaagtcttcgagcggcataacgccagcgccgacgccctggcaaccgccgaactg
gcgctgatcctgttcagccgtgcacgtcagcagcagattcacagcccgctgaacctgcag
cagcggttgaaccagtggaagcggcggcagcaaacacattctttctaa

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