Pseudomonas umsongensis: HGP31_29440
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Entry
HGP31_29440 CDS
T06842
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pum03021
]
HGP31_29440 (rpoH)
Transcription machinery [BR:
pum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HGP31_29440 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
QJC82222
UniProt:
A0AAE6ZZI8
LinkDB
All DBs
Position
complement(6486880..6487734)
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AA seq
284 aa
AA seq
DB search
MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKSTLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcagcctgcatatgctctggtcccgggtgcgaacctggaggcctat
gtgcacaccgtcaacagcattccattgctgacgccggagcaggagcgtgaactggccgag
agtctctattatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctattccggctacggcctggcccaggctgacctgatc
caggaaggtaacgtcggcctgatgaaggccgtgaagcgcttcaacccggaaatgggcgtg
cgcctggtgtcctttgccgtgcactggatcaaggcggagatccacgaattcatcctgcgt
aactggcggatcgtgaaagtcgcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaaaaaacgcctggcgtggctgaacaacgaggaagtccaccgtgtggcggaa
agcctcggggtggagccgcgggaagtgcgcgagatggaaagtcgcctgaccggtcacgac
atggccttcgacccggcggccgaagccgatgacgacagtgccttccagtcaccggccaac
tatctggaagaccaccggtacgacccggcccgtcagctggaagatgccgactggagcgac
aattccaaccacaacctgcacgaagcgctcgaagtgctggacgaccgcagccgcgacatc
ctctaccagcgctggctggcagaagaaaagtccacgctgcacgacctggcacagaagtac
aacgtgtcggccgagcgtattcgccagctcgagaagagcgcgatgaacaagctcaaactg
tccatcgccgcgtaa
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