KEGG   Pseudomonas umsongensis: HGP31_30225
Entry
HGP31_30225       CDS       T06842                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pum  Pseudomonas umsongensis
Pathway
pum00300  Lysine biosynthesis
pum00470  D-Amino acid metabolism
pum01100  Metabolic pathways
pum01110  Biosynthesis of secondary metabolites
pum01120  Microbial metabolism in diverse environments
pum01230  Biosynthesis of amino acids
Module
pum_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pum00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HGP31_30225 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HGP31_30225 (dapF)
Enzymes [BR:pum01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HGP31_30225 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QJC82371
UniProt: A0AAE7A2F6
LinkDB
Position
6653295..6654125
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQISVNM
GAPRLVPADIPFQAQEQALNYQVDVDGTPVELAAVSMGNPHAVVRVSDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcatatactgcccaagcatgccaagcaatggggcgaccggcatacc
ggcatcggtttcgaccaactgctgatcgtcgaagctccgagcaacccggacgttgacttc
cgctatcggatcttcaactccgacggctccgaagtggaacagtgcggcaacggtgcacgc
tgtttcgcccgttttgtgctcgataagcgcctgaccgcaaaacggcagatccgtgtcgaa
accaaaagcggcattatcgagctcgatgttcgcagcgatggccagatcagtgtcaacatg
ggcgctccacgcctggtgccggccgacattccgttccaggcgcaagaacaggccctgaac
tatcaggtcgacgtcgatggcacgcccgtcgaattggccgccgtgtccatgggcaacccc
catgccgtggtgcgggtcagcgatatcaacaacgcaccggtgcatgaactggggccgaaa
atcgagcatcacccgcgtttcccggcacgggtcaatgtcggttttctccaggttatcgac
cggagccgtgcgcagttgcgcgtctgggagcgcggggctggtgaaacccaggcctgcggt
accggcgcctgcgccgccgcagtcgctgcgatcagccaggggtggatggattcgccacta
ctgatcgacctgcctggcgggcgcttgtccattgaatgggcaggccctggccaaccggtc
atgatgaccggcccggcagtgcgcgtttatgaaggacaagtgcgtctttga

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