Pseudomonas umsongensis: HGP31_30225
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Entry
HGP31_30225 CDS
T06842
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00300
Lysine biosynthesis
pum00470
D-Amino acid metabolism
pum01100
Metabolic pathways
pum01110
Biosynthesis of secondary metabolites
pum01120
Microbial metabolism in diverse environments
pum01230
Biosynthesis of amino acids
Module
pum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HGP31_30225 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HGP31_30225 (dapF)
Enzymes [BR:
pum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HGP31_30225 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QJC82371
UniProt:
A0AAE7A2F6
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Position
6653295..6654125
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQISVNM
GAPRLVPADIPFQAQEQALNYQVDVDGTPVELAAVSMGNPHAVVRVSDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcatatactgcccaagcatgccaagcaatggggcgaccggcatacc
ggcatcggtttcgaccaactgctgatcgtcgaagctccgagcaacccggacgttgacttc
cgctatcggatcttcaactccgacggctccgaagtggaacagtgcggcaacggtgcacgc
tgtttcgcccgttttgtgctcgataagcgcctgaccgcaaaacggcagatccgtgtcgaa
accaaaagcggcattatcgagctcgatgttcgcagcgatggccagatcagtgtcaacatg
ggcgctccacgcctggtgccggccgacattccgttccaggcgcaagaacaggccctgaac
tatcaggtcgacgtcgatggcacgcccgtcgaattggccgccgtgtccatgggcaacccc
catgccgtggtgcgggtcagcgatatcaacaacgcaccggtgcatgaactggggccgaaa
atcgagcatcacccgcgtttcccggcacgggtcaatgtcggttttctccaggttatcgac
cggagccgtgcgcagttgcgcgtctgggagcgcggggctggtgaaacccaggcctgcggt
accggcgcctgcgccgccgcagtcgctgcgatcagccaggggtggatggattcgccacta
ctgatcgacctgcctggcgggcgcttgtccattgaatgggcaggccctggccaaccggtc
atgatgaccggcccggcagtgcgcgtttatgaaggacaagtgcgtctttga
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