Polaribacter sejongensis: NQP51_06540
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Entry
NQP51_06540 CDS
T08505
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pun
Polaribacter sejongensis
Brite
KEGG Orthology (KO) [BR:
pun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pun03009
]
NQP51_06540 (rimO)
Enzymes [BR:
pun01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NQP51_06540 (rimO)
Ribosome biogenesis [BR:
pun03009
]
Prokaryotic type
ribosomal protein modification factors
NQP51_06540 (rimO)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TMF_TATA_bd
TRAM
RtcR
Motif
Other DBs
NCBI-ProteinID:
UWD33333
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All DBs
Position
complement(1573664..1575016)
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AA seq
450 aa
AA seq
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MRTKTIKKNKINVVTLGCSKNIYDSEVLMGQLKANGKEVVHEDENDDGNIVVINTCGFIG
KAKEESIDTILHYANRKEAGEIDKVFVSGCLSERYKPDLEEQIPNVDQYFGTHDLPNLLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHVSTPIEDIVTEAT
KLAEKGIKEVMLIAQDLTYYGLDIYKKRALADLLVALTKVEGIEWIRMHYAFPTGFPMDV
LEVMKSEPKVCNYLDIPLQHINTELLKSMKRGTTHEKTTALIHKFREVVPEMAIRTTLIV
GYPGETEEMFQELKDWIEEMRFERMGAFEYSHEENTGAYVLEDDVPADVKFRRVNEIMEI
QSQISWELNQEKIGKTFRCLFDRKDGEFFYGRTESDSPDVDNDVIVDAKEHYIKIGEFID
IKIHEAGDYDLYGTPTVKQKKPVSLNQKRK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaaaccatcaaaaaaaataagatcaacgttgttactttaggttgttctaag
aatatttacgattctgaagtattaatggggcagttaaaagccaatggaaaagaggttgtt
catgaagatgaaaatgatgatgggaatattgtcgtaatcaatacttgtggctttattggt
aaggcaaaggaagaatctatcgatactattttgcactatgcaaacagaaaagaagctgga
gaaattgataaagtttttgtttctggatgtttaagtgaacgttataagccagatttagaa
gagcaaattcctaatgtagatcaatattttggtacgcatgatttacctaatttattaaag
gttttagaagcagattataagcacgagttaattggagaacgtttaacaacaactccaaaa
cattatgcatatttaaaaattgcagaaggttgcgatagaccttgttcattttgtgcaatt
cctttaatgagaggaaaacacgtttctactcctatagaagatattgttacagaagcaaca
aaattagccgaaaaaggaattaaagaagtaatgttaatcgcacaagatttaacttattat
ggattagatatttataagaaaagagcattagcagatttattagttgcgttaacaaaagta
gagggaattgagtggattagaatgcattatgcttttcctacaggtttccctatggatgtt
ttagaagtaatgaaaagcgagcctaaagtgtgtaattacctagatattcctttacaacac
attaatactgagttgttaaagtctatgaaacgtggtacaacgcatgaaaaaacaacagct
ttaattcataagtttagagaagttgtgccagaaatggctattagaactacattaattgta
ggttatccaggagaaacagaagaaatgtttcaagagttaaaagattggatagaagaaatg
cgttttgagcgtatgggagcttttgaatattctcatgaagaaaatacaggagcttatgtt
ttagaagatgatgtacctgcagatgttaagtttagaagagtaaatgaaattatggaaatt
caatctcaaatttcttgggaattgaatcaagaaaaaattggtaaaacttttagatgttta
ttcgacagaaaagacggagagtttttctatggaagaacagaatctgattcgccagatgtt
gataatgatgttattgtagatgcaaaagagcattatattaaaattggtgaatttatagat
atcaaaattcacgaagctggagattatgatttatacggtacaccaactgttaagcaaaaa
aagccagtttctttaaatcaaaaaagaaaataa
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