Polaribacter sejongensis: NQP51_14615
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Entry
NQP51_14615 CDS
T08505
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pun
Polaribacter sejongensis
Pathway
pun03030
DNA replication
pun03430
Mismatch repair
pun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQP51_14615 (dnaE)
03430 Mismatch repair
NQP51_14615 (dnaE)
03440 Homologous recombination
NQP51_14615 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pun03032
]
NQP51_14615 (dnaE)
03400 DNA repair and recombination proteins [BR:
pun03400
]
NQP51_14615 (dnaE)
Enzymes [BR:
pun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQP51_14615 (dnaE)
DNA replication proteins [BR:
pun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQP51_14615 (dnaE)
DNA repair and recombination proteins [BR:
pun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQP51_14615 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Menorin_N
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UWD31359
LinkDB
All DBs
Position
complement(3576123..3580463)
Genome browser
AA seq
1446 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCIQIAWQLHDEMGNVLEHNDFLIQPDNFNIPY
DAERIHGISTELAAEQGIPLSEGLVLFNEALAKTKFIVGQNLNFDLNIMGCEFHRLGVEN
NLNSLPILDTCTEKTATMCQIPGGRGGKFKLPTLTELHNHLFGVGFGEAHNATADVEATT
RCFLELIRLREYTKEQLDVDDDYFKNFSEANPKPIQVIGLKHINLKKESDIIRQRLEKLK
GTATTKSTSEGLAELENVQFSHLHNHTQYSVLQSTMQLGNIVKAAAKDNMPAVAMTDTAN
MMGAFHFVNAVLNHNKSADTPMKPIIGCEFNICEDHKNKSQKDNGYQVVLLAKNKKGYHN
LAKLSSAAFVDGFYYVPRIDKALVEQYKEDIIVLTGNLHGEVPSKILNLGEKQAEEALIW
WKEQFNDDLYIELMRHDQQDEKIVNETLLKFSKKHDVKIIATNNTFYLEKKDANAHDILL
CVKDGEKQSTPIGKGRGYRYGLPNDEYYFKSTDEMKKLFADIPEAISNIQEIVDKIEIFT
LARDVLLPAFNIGDEFKDPADEVDGGKRGENNFLKHLTFEGAKKRYGEITELIKERLDFE
LEVIEKTGYPGYFLIVEDFIRAARRMDVAVGPGRGSAAGSVVAYCLWITNIDPIQYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGDDAKSKGKVDGLRAEEKVLIEELKQMSYGNDLVSE
TINKATILEGSVRNTGIHACGVIITPGDITNYVPVALAKDSDMYVTQFDNSVVEDAGLLK
MDFLGLKTLTLIKDTVKIVKARHDITLDPETFPLDDVKTYELFQRGETVGIFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFVEQAAAKGHDPVKLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMKDIKAVSFFMEEC
KRMELQVFGPDLNESFLKFSVNNEGAVRFGMAAVKGVGAGAVRAIIKEREENGNYNSIFD
LSKRVDLRAANKKSFDSLIKAGAFDSFTDTHRAQYFATDEKGMTFLERAMKFGHKYQENE
NSAQVSMFGEASTVQFPEPDIPECETWGTMELLQQEKEVIGIYISAHPLDDFKNEIKFCN
ASLKYFKADLAKFVNMNLAFAGIVTDVQHRVSKAGKGWAMFTVEDYGDSNEFRIFGEDYL
RMQHFLVPNQFLFIRTTVQPGWTNKETGVVGEPRLKFLEMKLLHDIMDELCKKVTIQLPL
SEIKEDSILNLESILKKTPGKQNLNFTIWDEKEKLEISLPSRNTKVHITNELLASLDTQQ
IAYKLN
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatacagaaactaccggtttacctaaaagttggaatgctcctatt
acagatacggacaactggcctaggtgtattcaaattgcatggcaactccatgatgagatg
ggaaatgtgttagaacacaacgattttctaatacaaccagacaactttaatattccgtac
gatgcagaaagaattcatggaatttcgactgaattagcggcagaacaaggtattccttta
agtgaaggtttggttttatttaatgaagcgttagctaaaacgaagtttattgttggtcaa
aatttaaatttcgaccttaatattatgggatgtgaattccatagattgggtgtagaaaac
aatttaaattctttaccaattttagatacctgtaccgagaaaacggctactatgtgtcag
attcctgggggtcgtggtggtaaatttaaactaccaacattaacagaattacacaatcat
ttatttggtgttggttttggtgaagcgcacaacgcaactgccgatgttgaggctacaact
cgttgttttttagagttaattcgtttaagagaatataccaaagagcaattagatgtagat
gatgattattttaaaaatttctctgaggcgaacccaaaaccgattcaggtaattggttta
aaacacatcaatcttaaaaaggaaagcgatataattcgccaacgtttagagaaattaaaa
ggtactgcaacaactaaatctacatcagagggtctagctgagttagaaaacgttcaattt
tcgcatttacacaatcacacacaatattctgttttacaatctaccatgcaattgggtaat
attgtaaaagctgcagcaaaagacaatatgcctgcagttgccatgacggatacagcaaac
atgatgggggctttccattttgtaaatgctgttttaaaccataacaaatctgcagatact
cccatgaaaccaattattggttgtgagtttaatatctgtgaagatcataaaaacaaatcg
caaaaagacaacggttatcaggttgttttattagcaaaaaataaaaaaggatatcacaat
ttagcaaaattatcttctgcagcctttgtcgatgggttttactatgttcctagaattgat
aaagcgcttgtagaacagtacaaagaagacattattgttttaacaggaaacttacatgga
gaggttcctagtaaaattttaaatcttggagaaaaacaagcggaagaagcgttaatttgg
tggaaagaacaatttaacgacgatttgtatatcgagttaatgcgtcatgaccaacaagat
gaaaaaattgtaaatgaaactttattaaaattttctaaaaagcatgatgttaaaattatt
gctacaaacaacacgttttatttagaaaaaaaagatgcaaatgcacatgatattttatta
tgtgtaaaagatggcgagaagcaatctactcctattggtaaaggccgtggttatagatac
ggcttaccaaacgacgagtattattttaagtctacggacgaaatgaaaaagttgtttgca
gacattccggaagcaattagcaacattcaggaaattgtagataaaattgaaatttttaca
cttgcaagagatgttttattgccagcctttaatattggtgatgaatttaaagaccctgcg
gatgaagtagatggaggaaaacgtggagaaaataatttcttaaagcatttaacttttgaa
ggtgctaaaaaacgttatggagaaattacagaactgattaaggaacgtttagatttcgaa
ttagaagttattgaaaaaacaggatatcccgggtacttcttaattgtagaagattttatt
agagcagcaagaagaatggatgttgctgtaggtcctggtaggggttctgctgcaggttct
gtggttgcttattgtctttggattacaaatatagatcctattcaatacgatttacttttt
gagcgtttcttaaatccagaacgtgtatcgatgcccgatattgatattgattttgatgat
gaaggacgtggtcgtgtaatggattatgtaattgataaatatggtgcaaaccaagttgct
cagattattacgtacggaacaatggcagcaaaatcttctattagagatactgccagagtt
ttagatttaccgctttttgaagccgatagaattgcaaaattaattccgggaattaaacta
aaaaatatttttggcgatgatgctaaaagtaaaggtaaagttgatggtttacgtgcagaa
gaaaaagttcttatagaagaattaaaacaaatgtcttacggaaacgacttggtttccgaa
acgataaacaaagccaccattttagagggctctgttagaaataccggtattcatgcctgt
ggtgtaattattacgcctggggatattaccaattatgttccggttgctttggcaaaggat
tccgatatgtatgttacccagtttgataactctgtagtggaagacgcaggtttgttaaaa
atggatttcttgggattaaaaacactgactttaattaaagacactgttaaaattgtaaaa
gcaagacatgatattactttagatccagagacgtttcctttagatgatgtaaaaacatat
gaattgttccagcgaggagaaacggtaggtattttccagtatgaatctccaggaatgcag
aaacacatgcgttctttaaaaccgactgtttttgccgatttaattgccatgaatgcatta
tatcgtcctggtccgatggaatacattccgtcttttatcaatagaaaacacggaactgaa
gatattgagtacgatttacctgccatggaagagtatttggcagaaacctacggaattaca
gtataccaagagcaggtaatgcttttatcacaaaaactggcagattttacgaagggtgaa
gccgatgttttacgtaaagcgatgggtaaaaagcaaattgcagtactagataaaatgaaa
ccaaagtttgtagaacaagcagctgcaaagggacatgatccagtaaaattagagaaaatc
tggaaggattgggaagcctttgcaagttacgcctttaacaaatctcactctacgtgttat
gcatggatcgcttatcaaacggcatatttaaaagcacattaccctgcagaatatatggct
tctgtactttctaataatatgaaagatattaaagctgtttctttctttatggaggaatgt
aagcgaatggaattgcaagtttttggaccagatttaaatgaatcatttttaaaattctct
gtaaataatgaaggtgctgttcgttttggaatggcagcagtaaaaggtgttggagccgga
gcagtgagagctattattaaagagagagaagagaatggaaattataattcaatttttgat
ttatctaaacgggtagatttaagagctgccaataaaaaatcttttgatagtttgataaaa
gcaggtgctttcgattcatttacagacacccatagagcgcaatattttgctaccgatgaa
aaaggaatgacctttttagaacgtgccatgaagtttggacataaatatcaagaaaacgaa
aactctgctcaggtttctatgtttggagaagcttctacagtccagtttccagaaccagac
attccggaatgtgagacatggggaactatggagttgcttcaacaagaaaaggaagttatt
ggaatatatatttctgcacatcctttagatgattttaaaaatgaaataaaattctgcaac
gcttctttaaaatactttaaagccgatttagcaaaatttgtaaatatgaatttagctttt
gcaggaattgttaccgatgtacaacacagagtttctaaagcaggaaaaggttgggcaatg
tttacggttgaagattatggtgatagtaatgaatttaggatttttggagaagattaccta
agaatgcagcacttcttagtacctaatcaatttttatttatacgtactaccgtgcaacct
ggttggactaataaagaaacaggagttgttggtgaacctaggttaaagttcttagaaatg
aaattgctacatgatattatggatgaactatgtaaaaaagtaaccattcaacttccttta
agtgaaattaaagaagattctattttaaacttagaatccattttaaagaagactcctggt
aaacaaaatttaaatttcactatttgggacgaaaaagaaaaactagaaattagcttgcca
agtagaaatacaaaggttcacataaccaacgagttgttagcaagtttagatacacagcaa
attgcatataaattaaactaa
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