Rubellicoccus peritrichatus: RZN69_03605
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Entry
RZN69_03605 CDS
T09488
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
puo
Rubellicoccus peritrichatus
Pathway
puo03030
DNA replication
puo03430
Mismatch repair
puo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RZN69_03605
03430 Mismatch repair
RZN69_03605
03440 Homologous recombination
RZN69_03605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puo03032
]
RZN69_03605
03400 DNA repair and recombination proteins [BR:
puo03400
]
RZN69_03605
Enzymes [BR:
puo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RZN69_03605
DNA replication proteins [BR:
puo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RZN69_03605
DNA repair and recombination proteins [BR:
puo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RZN69_03605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DNApol_Exo
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WOO42161
UniProt:
A0AAQ3LB23
LinkDB
All DBs
Position
890619..891317
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AA seq
232 aa
AA seq
DB search
MSLLGKDDEIQIYRESFDETWADGTPINQVRYIVLDTETTGLDPRKDSIVTIGAVAVEDG
SICLDDQFEALLRISHNTSSVVVHGITRDDANEEGMDEVLALRLLLGYLRDGVIVGHHIG
FDVDIISEHCQRRFGLSLENRWIDTMELTLHLEDAGAFGPPPDNGGRGHDFSLDGLCRRF
DIQPHDRHTAAGDAFITAQIFMKLLRQAKQYGRRTLGSLCERYEDPSATPQA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgggaaaagacgacgaaattcaaatttaccgcgaatcctttgacgaaacc
tgggcagacgggactcccatcaaccaagtccgctacatcgtcttggatactgagacgaca
gggctcgatccacgcaaggattcaattgtaacgatcggtgccgtcgcagtcgaagatggt
tccatctgccttgatgaccagtttgaagctttgttgcgaatcagccacaatacctcatcc
gttgttgtacacggcatcactcgcgatgatgcaaacgaggaaggcatggatgaagtgctg
gctcttcgtctgcttctgggctatctcagggatggtgttattgtcggacaccacattgga
tttgatgtcgatattatcagcgaacactgccaacggcggttcggcctatcacttgaaaat
cggtggattgatacgatggagctaacgcttcacctggaagatgcaggcgcatttggaccg
cctccggataatggcggacggggccatgatttctcactcgatggcctctgtcgccgtttt
gatattcaacctcacgaccgtcataccgcggcgggagatgccttcatcacagctcagatt
ttcatgaagctacttcgtcaagccaaacagtatggacgccgaaccctcgggtctctctgc
gaacgttacgaagacccatcggccactccccaggcatga
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