Rubellicoccus peritrichatus: RZN69_08080
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Entry
RZN69_08080 CDS
T09488
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
puo
Rubellicoccus peritrichatus
Brite
KEGG Orthology (KO) [BR:
puo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puo03032
]
RZN69_08080 (gyrB)
03400 DNA repair and recombination proteins [BR:
puo03400
]
RZN69_08080 (gyrB)
Enzymes [BR:
puo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RZN69_08080 (gyrB)
DNA replication proteins [BR:
puo03032
]
Prokaryotic type
DNA Topoisomerases
RZN69_08080 (gyrB)
DNA repair and recombination proteins [BR:
puo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RZN69_08080 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
WOO43049
UniProt:
A0AAQ3LBH7
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All DBs
Position
1964782..1967280
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AA seq
832 aa
AA seq
DB search
MAKKKAKDPVSYDVDSLGKLEGLEAVRKRPGMYIGNVTNGDALHHCVFEVVDNSVDEHLA
GFCQNINVVIHLDGSCSVEDDGRGIPVKVHKEFGKPGVEMVLTELHAGGKFGQGGYKVSG
GLHGVGASCVNAVSEWLVAEIHRDGEIHKMGFARGDVTEPLHVVGPTKTTGTKITFLRDT
EIFVTEHEYKYDQLAKRLRELAFLNPGISITFKDERDDRSETFKFDQGAAQYVSWLNRNK
AVLTQEPIHFVGEIAPDDEKPEEMIAVDVALQYNDTYNEQIYPYANSIYNGDGGTHLSGF
RTSLTRAVNTYAKANKLLKDKDPSISGEDVREGLTAVISVKLHNPSFNNQTKDKLLNQEV
DGIVQRVMGDKLKIYFDQNPKVAKRIIDKCVSAARAREAARKARETVRKSVMSGGGLPGN
LADCSEKNPELCEVFIVEGDSAGGSAKQGRDRRYQAILPLFGKPLNVEKARLDKMLNNKN
IRLLITALGTGIGAEGDGAFDLTKARYHKVILMADADVDGSHIMTLYLTFFFRFMRPLVE
AGYIYIAQPPLYKIKRKRREQYVDNDVQMNRILLELGSEDVILTRLRDSHDFTAAKVDRA
VEAISQIEVLGRGVSRYGCPVYKYLDAHDEKTHELPKYIARIRTGNQEEFVFLNTDEDRT
AFYTENEITEDMFAGMTIREKVIDDITYQQRISVHEIHEALALTKVLKELAKIGLDIHQF
SPTEEARYTLTENKGQKNENVVEMHTILSLVEQIRLFGRKGLTIQRYKGLGEMNPKQLYE
TTMDPEKRRLLKVDISDAAKADATFSMLMGEDVPSRRAFIEDNALNTSYLDA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaaagcaaaagaccccgttagttacgacgtagattcacttggtaagctc
gaagggctggaggccgttcgtaagcgtccaggcatgtatattggtaacgtcaccaacggc
gacgcacttcaccattgtgtgttcgaagtggttgataactcggtggatgaacacctggca
ggattctgtcagaatatcaatgtcgtcatccatctcgacggttcctgctccgttgaggat
gacggtcgcggcatcccggttaaggtccacaaggaatttggaaaacccggtgtggaaatg
gtgctgacagagcttcatgcgggtggaaaatttggccagggtggctataaagtttccggc
gggctccacggtgtgggtgccagttgtgtgaatgcagtctccgaatggctcgtagctgag
attcatcgcgatggcgaaattcacaagatgggttttgcccgtggtgatgtgactgagccg
ttgcacgttgtcgggccaaccaaaaccaccggcacgaaaattacttttctgcgcgataca
gagatttttgtcacagagcacgaatataagtatgatcaactggccaagcgcttgcgtgag
cttgccttcctcaatcctggcatttcgattactttcaaggatgagcgcgacgaccgcagc
gaaacctttaagttcgatcaaggtgctgcgcagtatgtttcctggctcaatcgtaataag
gcggttctgacccaggagccgattcactttgtcggtgaaattgctccggatgatgaaaaa
ccggaagagatgatcgccgtcgatgttgctctgcaatacaacgacacttacaatgagcag
atctatccttatgccaactccatttataatggtgatggcggtacgcatttgtctggcttc
aggacatcattgactcgtgcggtcaacacctatgccaaggccaacaagttattgaaggat
aaggacccctcaatctccggggaagatgttcgtgaaggactaaccgctgttatttcggtc
aagcttcacaatccaagtttcaataatcagaccaaggacaagctgctcaatcaagaggta
gatggcattgtgcagcgtgtgatgggtgacaaattgaagatttacttcgatcaaaatcca
aaggttgccaagcgcatcattgataagtgcgttagcgcagcgcgtgctcgcgaagctgct
agaaaggcccgtgaaacagtgcgcaagtcggttatgtccggcggtggattgccagggaat
cttgctgattgctcagagaaaaatccagagctttgtgaagtctttattgttgagggtgac
tcagctggtggttccgccaagcaggggcgtgatcgtcgttatcaggcgatccttccgctt
ttcggcaagccgcttaacgtcgagaaggcgcgtctcgacaagatgttgaataacaaaaat
attcgccttctgatcactgctcttggaacagggattggggcagaaggagacggcgcattt
gatttaaccaaagcacgttaccacaaagttatcctaatggctgacgcggatgtggatggt
tcgcacatcatgacgctttacctgaccttcttcttccgcttcatgcggccattagttgag
gcaggatacatttatatcgcacagcctccgctctataagatcaagcgtaagcgccgtgag
cagtatgtggacaatgatgtgcaaatgaatcgtattcttttggagcttggctccgaggat
gtgattcttacacgcctgcgtgatagtcatgactttactgccgccaaggtggaccgcgct
gtcgaggccatttcccagatcgaagtattgggccgcggtgtttcccgttatggatgtccg
gtttataaatatctggatgcacatgatgaaaagacgcatgagctcccgaaatatattgcg
cgtattcgtactggtaaccaggaagagtttgttttcttgaatacggatgaagatcgcact
gcgttctatactgagaacgagatcacggaagacatgttcgcgggcatgaccattcgtgag
aaggtgattgatgatattacctatcaacagcgaatctcagttcatgaaatccatgaggcc
ctggccttgaccaaggttctgaaggagctggccaagattggcctcgatattcaccagttt
agtccgacggaggaagcacgttatacgctgaccgaaaacaagggccagaaaaacgagaac
gttgtcgagatgcacaccattctctcactcgtcgaacagatccgcctctttggacgcaaa
ggtctgaccattcagcgatacaaaggactgggtgagatgaatccaaagcagctttatgaa
acaacgatggatccggaaaagcgccgccttctcaaggtcgacatttccgatgctgccaag
gccgatgccactttctccatgcttatgggtgaagatgttccatcccgtcgcgcatttatt
gaagacaacgcactgaacacaagttacctggacgcctaa
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