Rubellicoccus peritrichatus: RZN69_10160
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Entry
RZN69_10160 CDS
T09488
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
puo
Rubellicoccus peritrichatus
Pathway
puo03030
DNA replication
puo03430
Mismatch repair
puo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RZN69_10160 (dnaE)
03430 Mismatch repair
RZN69_10160 (dnaE)
03440 Homologous recombination
RZN69_10160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puo03032
]
RZN69_10160 (dnaE)
03400 DNA repair and recombination proteins [BR:
puo03400
]
RZN69_10160 (dnaE)
Enzymes [BR:
puo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RZN69_10160 (dnaE)
DNA replication proteins [BR:
puo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RZN69_10160 (dnaE)
DNA repair and recombination proteins [BR:
puo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RZN69_10160 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WOO43452
UniProt:
A0AAQ3LDM6
LinkDB
All DBs
Position
2505803..2509531
Genome browser
AA seq
1242 aa
AA seq
DB search
MSADKEFVHLHVHTDYSLLDGCSRIDRLCSRAAELGMKALSITDHGVLFGLASFFKQAQK
HGIKPLLGCEIYLVYEDKLAEVNELRAKQKSHHMGLLARNFTGYQNLTKLVSAGHVHGFY
RNPRVDMTQLAEHSEGLIGFSGCLAAVIPQKIMEGDLAGAREACSRFIDIFTKEFFFIEL
MDHGISEQQQCNVELLKIAKEFDLKVVCTNDVHYVGKDDWRPHDSLLCIQTGARLHDEKR
LRYDSHQFYLKSREEMELAFSEVKEGIINTSAVAEMCEVELPFGQDHYPVFEKPVELSYN
KDKVNFERVLDIYVESKNKVLVREGQEPITLSNEERSKFASNGLYLFELCKEGLEERYGA
NYDSVRARAAAVEGEIEDEELKRSVRLCDQLDYELAIIIGTGFTDYFLIVWDFIKWARDR
GIPVGPGRGSGAGCVVAYVLKITDIDPFRFGLLFERMLNLERVSPPDFDVDFCMRRRDEV
VNYVRDKYGEDRVANIITFGTFGAKMIVRDLARVNDIPFGEADKIAKMIPDELNISLDDA
VTKSAELQDEVKRNEVARKIIDQGKVIEGMVRNTGKHACGVIIADQPITNLIPVTMQEGD
LTTQYPKGPSEDLGLLKMDFLGLKNLTVVSDCQESIRNIRGEKDFDIEKVSLDDELTFKL
LGEARTIGVFQLESGGMQGLCRQLEVSSIDEIVALIALYRPGPMQFIPQYIKGKKDRSTI
EVPHPLVKELVEETYGVLVYQEQVMQAAQIIAGYTLGGADILRRAMGKKIKSVMDQQKDV
FVKGAKETNNIDRKKAEAIFGILEKFAQYGFNKSHSAAYAMISYRTAYLKANYPVEYMAA
LLSSELGNADKVSHFVEEADSMGIVVLGPDVNESRESFTPVLDGEAGGRIRFGLAAVKGV
GDAAARLILEERDERGAFEGFRDFIERVDTKACNRRVLECLIKTGAFDYAGVDRQHMLDS
LDGMLNEVADLEKDKASGQANMFDMLADDSSSDDKASSDQSGFNTSGSLMENLTKLEYER
ELLGFYISGHPVNQFAGLDQYVNSFGPDEDLKQWDREGFRLVGVINNVVKRLTKKDNRPW
CYFSLSTLKSTHQVNVFPDAYEANLGQFEDGALVCVTGEIRYDSERSEVRLNASHLGAAD
KAIQAFLNSVTFYVDPAEPDFSDFISTLSDFLQNHEGPTEVKLGVMVEPGKALIAELAQS
LHARLSPEGFKKLKAHPAVRRVTGEGKNAPTPERPRWERASA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgataaagaattcgtccaccttcacgttcacacagattacagtctcctggat
ggctgttcgaggattgatcgtttgtgctcaagggcggcggaattagggatgaaagccctg
tcgattacggatcatggcgtgctctttgggttagctagctttttcaagcaggcgcaaaag
catgggatcaagccattgctcggttgcgagatctatctggtctatgaagacaaactggcc
gaggtcaatgagctgcgggctaagcagaagagtcatcatatgggtttgctggcgcgaaac
ttcactggttaccaaaacctgaccaagctggttagtgccggtcatgtgcatggcttttat
cgcaacccgcgcgtagatatgacgcaactagcggagcatagtgaggggttgatcggcttc
agcggatgtcttgccgcggtgattccgcaaaagatcatggaaggcgatctagcaggtgcg
cgcgaggcttgtagtcgtttcattgatatctttacgaaggagttctttttcatcgaactg
atggatcacggcatttccgagcagcagcaatgcaatgttgagctactcaagatcgccaag
gagttcgatcttaaggtggtttgtacgaatgatgtccattatgtcggcaaggacgactgg
cggccgcatgacagtttactttgcatccagactggtgcccgactccacgatgaaaagcga
ctccgttatgattcgcatcagttctatctgaagagccgcgaagaaatggagttagctttc
agcgaagtcaaagagggcattatcaatacttcggctgtcgcggaaatgtgcgaagtggag
ctgccgtttgggcaggaccactacccggtatttgagaagcctgtcgagctgagttataat
aaggacaaggttaacttcgagcgcgttcttgatatatacgttgaaagcaagaataaggtt
ctggttcgtgaaggtcaggagccgattacactgagtaatgaagaacggtccaagtttgcc
agtaatggcctctacctcttcgaactttgtaaagaaggtctggaagagcgctatggtgcc
aattatgattcagtcagagctcgggcagctgctgtcgaaggtgagatcgaagacgaggag
cttaagcgaagcgtgcgcctttgcgatcagttggattatgaattggccatcattatcggg
acgggttttacagattacttcctgattgtttgggactttatcaaatgggcgcgtgaccgc
ggtattccagtagggccgggacgtggttctggtgcaggttgcgtagtcgcctatgtctta
aagatcaccgacatcgacccgttccgtttcggtttacttttcgaacgtatgctgaatctg
gagcgtgtctctccgccggactttgacgtcgacttctgtatgcgtcgccgtgatgaggtc
gttaattacgttcgtgacaaatacggcgaagaccgcgtggccaacatcattacctttgga
acctttggcgccaagatgatcgtccgcgaccttgcacgagtgaatgacatccccttcggc
gaagcggacaaaattgccaagatgattccagacgagctgaacatctcactggatgatgcc
gtgacaaagtctgctgaacttcaggatgaggttaagcgcaacgaggtagccaggaaaatc
atcgatcagggcaaggtaatcgaagggatggttcgtaatacaggtaaacatgcctgtgga
gtcattattgcggaccagccgatcaccaatctcattcctgtgaccatgcaggaaggagac
ctgacgacgcagtatcccaaagggccaagcgaagacctgggattgctcaagatggacttt
ctcgggctgaagaatttgaccgtcgtctctgattgtcaggagtccattcgaaatatccga
ggagagaaggacttcgatattgagaaagtttcccttgatgacgaactgacgttcaaactt
ctgggcgaagcgcgaaccattggtgtcttccagttggagtcgggtggtatgcagggcttg
tgtcgccagttggaggtttcttcgattgatgagatcgtggcattgattgcgctctaccgt
ccagggccgatgcagtttattccccaatacattaaagggaaaaaggatcgttcgaccatt
gaagtgccgcatccgctggttaaggaactggtggaagaaacctacggcgttctggtttat
caggagcaggttatgcaggcggcgcaaattattgctggatacaccctgggtggtgcggat
attcttcgtcgtgcgatggggaagaagatcaagtccgtcatggaccagcagaaagacgtc
tttgtcaaaggtgccaaggaaaccaataatattgatcgcaaaaaggcggaagcgattttt
ggtattctggaaaagttcgctcaatacggatttaacaaatcccactcggcggcgtatgcc
atgatcagctaccggacggcttacttgaaggccaattatccggtggaatacatggcggct
ttgctttcctccgagctcggtaatgcagacaaagtaagccactttgttgaggaagcggat
agcatggggatcgttgtcctcggaccagacgtgaatgaatcacgtgagagttttacaccg
gttcttgatggtgaagcaggtggccgcattcgttttggtttggcggcggtcaaaggggta
ggggatgccgctgcccgtttgatccttgaagaacgagatgagcgcggagcttttgaaggc
tttagagactttatcgaacgtgtagacacgaaggcatgcaaccgtcgtgttttggaatgt
ttgattaagactggtgcctttgattatgccggagtggaccgccagcatatgctggattcc
cttgacgggatgttgaacgaagtcgctgacctggagaaagacaaggctagcggtcaggct
aacatgttcgatatgcttgctgatgattcgtcttcagatgataaagcatcttcggaccag
agtggctttaatacgagtggttcgctgatggagaatctgacgaaacttgagtacgaacgt
gagttgctcggattctacatttcagggcatccagtgaatcagtttgccggactcgatcag
tatgttaattcctttgggccggatgaagatttaaagcaatgggatcgtgaaggcttccgg
cttgttggtgtcatcaataacgtagtgaaacgtcttacgaaaaaagataatcgcccatgg
tgttatttctcactctcaactttaaaaagcacgcatcaggtcaatgtgttcccagatgca
tacgaagcaaatctcggacagtttgaggatggagctttggtctgtgtgaccggcgaaatt
cgttatgatagcgagcgcagtgaggttcgcctgaatgcaagccatcttggtgcagctgat
aaggcgattcaggcttttctcaattcggtgactttttatgtcgatccggcggagccggat
ttcagcgatttcatttcaactttgtccgactttttgcaaaaccatgaaggaccaaccgaa
gtgaagctcggagtgatggttgaaccaggcaaggcactcattgccgaacttgcccaatca
ctccacgcacgtttgtctcctgaaggctttaagaaactaaaagctcatccggctgttcgt
cgtgttactggtgaaggcaaaaatgcgccgacaccggagcgtccacgctgggagcgcgcg
agtgcttag
DBGET
integrated database retrieval system
