Rubellicoccus peritrichatus: RZN69_11670
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Entry
RZN69_11670 CDS
T09488
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
puo
Rubellicoccus peritrichatus
Pathway
puo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
puo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RZN69_11670
09124 Replication and repair
03420 Nucleotide excision repair
RZN69_11670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puo03021
]
RZN69_11670
03036 Chromosome and associated proteins [BR:
puo03036
]
RZN69_11670
03400 DNA repair and recombination proteins [BR:
puo03400
]
RZN69_11670
Enzymes [BR:
puo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RZN69_11670
Transcription machinery [BR:
puo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RZN69_11670
Chromosome and associated proteins [BR:
puo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RZN69_11670
DNA repair and recombination proteins [BR:
puo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RZN69_11670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
PDDEXK_1
ResIII
DEAD
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
WOO39272
UniProt:
A0AAQ3QU44
LinkDB
All DBs
Position
2914813..2917149
Genome browser
AA seq
778 aa
AA seq
DB search
MKLSADERRAVLSAKDFACFDETPLRPAGSYAQPWRAAVGSAWHAKLREQLEAEDSTARF
EVSVAASIPHRGWVLELNGRIDQLVQQADKVILREVKTVTRSLPVDEADLLADYPEHFLQ
LACYLVLAQADPKFEPKGRLEGELVFVDYRAGVIQSVKLPTSFDRFFEEQADRLVGYLEE
KRRHLTRIRQITVGSAFESLRPEQDLALKDLKASVGSITAFQAPTGFGKTGVAQQAALEQ
LVEGQYDRVIFLSGKSTGQIQAIRQLEAFASQSKTALRFFQLRSKREHAERCLIANCDAR
LSCRESLEKGWRTANLTPQKYFDEGTIKMDSVITMSGETGICPFELSKSFLPYVEVWVCD
YNYVFSPRHGGLFENLQDYDAERTCLIVDEAHNLPQRVADNYSFALSSYDAESVINELRY
RGASGKLLAPWERWSEFLSGLKAADEHPSLIEYEAIDLLEALTEAINHAQIDWDEIQPTV
ADRIFDVGWHLRTLSDERMKRLAWSRSNAELRVECLDASHLIGEKLNSYASAFLMSATLE
PLSLFWESIGGQTDRSRFIPAASPWREEAYSVAIDARVDTRFRRRADYYTTTADTVARLT
LDSATPVAVFFPSYQYAETIRAYLNSEQPLTQVAMQPRAVDLGGQMRFIEEALLTSHALF
FVLGSSFSESVDYLGGKIERAMVVGPALPEVNAIQRARIANTQTTSRDEAFRRVYILPAM
HKINQALGRLVRAPGQQAKVLLHCRRFREEQYQELLDSDFVPEQTIRADDELENWLNE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgtctgctgatgaacgccgcgctgttttaagtgccaaggatttcgcttgtttc
gatgagacgccgcttcgtccggcgggttcttatgcccagccctggagggcagcagttggt
tcagcctggcatgcaaaattgcgtgagcagctggaggcggaagattcaactgcgcgtttt
gaggtaagtgtcgccgccagcattccgcatcgtggatgggttttggagttgaacggtcgt
attgaccaattggttcagcaggctgataaagtgattctgcgagaggtgaaaaccgtcacc
cgaagtctgcctgttgatgaagcagatttactggcagattatcccgagcatttcctgcaa
ttggcgtgctaccttgtgctggcgcaggcagatcccaagtttgaacccaaaggacgtctg
gaaggtgaattggttttcgtcgattaccgtgccggggtgattcagtccgttaagttgccg
acaagtttcgatcggttcttcgaagaacaggcggaccgtcttgttggttatttggaggag
aagcgcagacatctgacacgcattcgccagatcacggtaggttctgcttttgaaagttta
cgaccggagcaggatctagctttgaaagacttgaaggcgagtgtgggaagcatcaccgcg
tttcaggctccaacaggttttggaaagaccggagttgctcagcaggcggctctcgaacaa
ctggtcgaggggcagtacgatcgggttatttttctctctggaaaatctaccggtcagatt
caggcgattcgtcaactcgaggcatttgcatcacaaagtaagactgcactgcgcttcttt
caattgcggagtaagcgcgaacatgccgagcgttgccttatcgcgaattgcgatgcgcgg
ttgagttgcagggagtctttggagaaaggatggcggactgctaatttgactcctcaaaag
tactttgatgaaggaaccatcaagatggattcggttattaccatgtccggtgaaaccggg
atttgtccctttgagctttccaagtcttttctgccttacgttgaagtctgggtgtgtgat
tacaactatgtgttctcaccacgccatggcgggctttttgagaacctgcaggattacgat
gcggagcgcacatgcctgattgttgatgaggcgcacaatttgccacaacgggtagcggac
aactacagctttgccctgagcagttatgatgcggaatctgttatcaatgaactgcgttat
cgcggtgcaagcggtaagctcttggccccgtgggagcgttggagtgaattcctttccgga
cttaaggctgcggacgaacatccatcgctgatcgaatacgaagccattgatttgctggag
gctttaacggaagctatcaatcatgcgcagatcgattgggatgaaattcaaccgactgtt
gctgatcgcatctttgatgtggggtggcaccttcgtacgttatctgatgaaagaatgaaa
cgcttggcctggtcacgttccaatgctgagctgcgcgtcgaatgtctggatgcgtcacac
ttgattggcgagaaactgaactcatatgccagcgcttttttgatgtcggcaactctggag
ccattgagtctcttctgggaaagtattggtgggcagacggatcgcagtcgctttattccg
gccgcaagcccatggcgtgaggaagcctattccgtcgccatcgatgcgcgtgtggatacg
cgttttcgtcgtcgagcggattattacaccacgacagcggacaccgttgcacggctgact
ttggattccgcaacaccagtggcagtcttttttcccagctatcagtatgcggaaaccata
cgtgcttatttgaattccgagcagccgctgactcaggttgccatgcaaccgagagcagtg
gacttgggagggcagatgcgtttcatcgaagaagccttgttaacgtcgcacgcacttttc
tttgttctcggaagcagcttcagtgagagtgttgattatctcggcggcaaaattgaacgt
gcgatggtggtagggccggctcttccggaagtgaacgccatccagcgcgcgcggatagca
aatacacaaacgacaagccgggatgaggcgtttcgtcgtgtttatattttacccgcgatg
cataaaatcaatcaagccttgggcagactggttcgtgctccgggacaacaagcaaaagtg
ctgcttcattgtcgtcgctttcgtgaggaacagtatcaggaattactcgactcggatttc
gttccagagcaaaccattcgggctgatgacgaacttgagaattggcttaatgaatag
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