Rubellicoccus peritrichatus: RZN69_19285
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Entry
RZN69_19285 CDS
T09488
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
puo
Rubellicoccus peritrichatus
Pathway
puo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
puo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RZN69_19285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puo03400
]
RZN69_19285
Enzymes [BR:
puo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RZN69_19285
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RZN69_19285
DNA repair and recombination proteins [BR:
puo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RZN69_19285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WOO40772
UniProt:
A0AAQ3QVF7
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All DBs
Position
complement(4921401..4922198)
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AA seq
265 aa
AA seq
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MPELAEVEYYRKQWDPALGKKIIRVCLHADKRVFRGSDTNAIEKELTGAIFRKSYAHGKQ
MLFEFSGGRWLGVHLGMTGELYTEQLPYAPDKHEHLVLETKKVAIVFKDPRLFGRIRFDA
EKGFPDWWRALPPDVLSDDFSQDSLNNFLKRRSKSSIKAVLLMQERFPGIGNWMADEMLW
RAGIHPATPAGSISSQKVTQLFNEIKAVCSDAMEVIGTDWSDPPDTWLFNHRWKDGGVCP
KTNVPLMRDQIGGRTTCWSPARQRL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctagccgaagttgagtattatcgtaagcaatgggaccctgcattgggaaaa
aaaatcattcgtgtttgtctgcatgcagacaagcgtgtctttcgcggtagtgataccaat
gcaatcgagaaggagctaacgggcgctatcttccgtaaatcatatgcacatggcaaacag
atgctttttgagttctctggtggacgatggcttggggtgcatctgggaatgacaggtgag
ctttacactgagcagttaccttacgctcctgataaacatgagcatctggttcttgaaaca
aaaaaggtggctatagtctttaaagatccacgtcttttcggacgcattcgctttgatgcc
gagaaaggttttcctgattggtggcgagcattacctccggatgtgctatcggatgacttt
agccaggattccctcaataactttcttaagcggcgttccaaatcatcaatcaaggcagtg
ttgttgatgcaagagcgctttcctggtatagggaactggatggcggatgagatgctgtgg
cgggccggaattcatccagcgacacctgctggttccatatcatctcaaaaggtcactcag
ctctttaacgagataaaagctgtgtgcagtgatgctatggaagtcatcggaacagactgg
tctgatccacctgatacctggctttttaaccatcgctggaaagacggtggggtttgcccc
aaaactaatgtgcccttgatgcgtgatcaaattggtggtcgaacgacctgttggagcccg
gcgaggcaaaggctatag
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