KEGG   Psychrobacter urativorans: AOC03_00230
Entry
AOC03_00230       CDS       T04087                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pur  Psychrobacter urativorans
Pathway
pur03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOC03_00230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pur03019]
    AOC03_00230
Enzymes [BR:pur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AOC03_00230
Messenger RNA biogenesis [BR:pur03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AOC03_00230
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_30 AAA_19 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ALF58664
UniProt: A0A0M4U504
LinkDB
Position
48252..49406
AA seq 384 aa
MSNFTTFTDLPLSAPTLKAIDDLGFTELTAIQAQILPHTLAHQDAIGQAQTGTGKTATFL
LTIMEALLTRPFASDEDRYLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGT
NYETQQHELERQYVDILIATPGRLIDLMNKGMVYLDRVEVLVLDEADRMLDMGFIPDIKR
LVGRMPPNTDRQSLLFSATFNQDVMNLAYRWLHEPQFVEIEPEHKTSELVEQHFYLLTES
QKLEALERILNDEGVDKVIIFANRKDQVKRLYHKLRQGHNIVMLSGDVIQQKREKYLQRF
KDGHASILVATDVAGRGIHVDDISHVINYTLPEQPDDYVHRIGRTGRAGQTGISISFVSE
DDAFNLPALEKHLDTKFTLEQWQQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
ttgagtaacttcacgacttttacggacttaccactgtcagcaccgacattaaaagcaatc
gatgacttagggtttaccgagctgactgccattcaagcgcaaatattgccacatacctta
gcgcatcaagatgctatcgggcaggcgcaaacgggtacaggaaagaccgccacatttttg
ctgacaattatggaagcattgcttacgcgtccttttgcgagtgatgaagatcgctattta
ggtgagccacgtgccgttgtgatggcgcctactcgcgagcttgcgcagcagatatttgat
gattgtatcgcattgactaaatatacctcgctgcatagtgtatgtatcatgggtggtacg
aattatgaaacgcagcagcatgagcttgagcgtcaatatgttgatattttgattgccaca
ccaggacgtctgattgatttaatgaataaaggcatggtatatcttgaccgtgtggaagta
ttggtattagatgaagccgaccgtatgttggatatgggttttattcctgatatcaagcgt
ttggtaggtagaatgccgccgaatactgaccgccaaagcttactgttttcggcaacattt
aaccaagatgtgatgaatttagcctatcgctggttgcatgagccacagtttgtcgaaatt
gagccggaacataagaccagtgagctggtagagcagcatttttatctactaacagaaagt
cagaaattagaagcactagagcgtattctcaacgatgagggcgtggataaagttattatc
tttgccaatcgtaaagaccaagtgaaacgtctgtatcataaactgcgtcaagggcataac
atcgttatgctatctggtgatgtgattcagcaaaaacgtgagaaatatttacagcgtttt
aaggatggtcatgcgtcaatattggtagcgaccgatgtcgctgggcgcggtattcatgtt
gacgatatcagtcatgtgattaattatacgttgccagaacaacctgatgattatgtgcat
cgtattggacgcactggacgcgctggacagacaggcattagtattagctttgttagcgaa
gacgatgcctttaatttaccagcattagagaagcatttagataccaagttcactcttgag
caatggcagcagtaa

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