Psychrobacter urativorans: AOC03_01085
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Entry
AOC03_01085 CDS
T04087
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pur
Psychrobacter urativorans
Pathway
pur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOC03_01085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pur03400
]
AOC03_01085
Enzymes [BR:
pur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOC03_01085
DNA repair and recombination proteins [BR:
pur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOC03_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
SLFN-g3_helicase
Helicase_RecD
UvrD-helicase
Herpes_Helicase
AAA_22
PhoH
nSTAND3
AAA_16
NPHP3_N
AAA_25
ResIII
NACHT
HBD
AAA_28
CaM_bind
PIF1
DEAD
TraI_hel_assoc_N
Spore_Cse60
Motif
Other DBs
NCBI-ProteinID:
ALF60679
UniProt:
A0A0M4TGN7
LinkDB
All DBs
Position
254909..257089
Genome browser
AA seq
726 aa
AA seq
DB search
MVINNQSKVESDVSNSWATTICQYLSQRRIQTKVAYQAQLQSNNIYDEDREPQDWLFDAI
FEILIQRLEEGHTVLVLNDSDSNTSSSSKLYRWQQQLLQPLLQSLLIPTNGIVATIDFEI
LENIALWETLLLQTMLSEYEQKILRQRYSICVSLYHYFQYVYEHSKDITDSLNIFIKTIK
SAQLFEIVNIKNEIINNPIVFQIENSLESNAVAKKNISITLWLHRTWQAEYDLARHIIRI
KQQTINELPIVLSPLLNAEQKAAIHMANRSAFSIITGGPGTGKTFTVAQLVIALQQAQND
NEVGSVSSHANLALAAPTGKAAQRMQESLQDAIQHAGVTMQLPEAKTIHRLLGIGQGGRP
RYNTANPLSEDIVIVDEASMLGVEMANYLVSAIKPNARLILLGDANQLAAVDAGAVLADL
CRIPVLQDIHKRLDVSRRFTTESGIGKLASLINSSITDMPAVWKLMQDEETLSFYQLSNH
LSEPLSEKEIAVTNDNSINTFSTLKVLKILLEKYSHYINDSKKILIETNTLKSPSTAQYM
TYFKELMTVLNTFKVLTAGHNGRCGDHYINRYLSEQHKEQLKLPLSKSPWYHGRPVMILQ
NNYELGLFNGDIGICLQTERGILQVFFENKIQGIAVNMFSDDMIATAYAMTIHKSQGSEF
EHVAISFDDNNARLLSQELIYTAVTRAKKQVTIFSTTSAFTRALSTPTVRQTGLGLQFAN
LDSVTE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttggttattaacaaccaaagtaaagtggaatcagatgttagtaacagttgggcgacaacc
atctgtcagtatttatcacagcgtcgaatacagacgaaagttgcgtatcaggcacaatta
caatcaaataatatttatgatgaagatagggagccgcaagactggttattcgacgcgata
tttgaaatactgatacagcgcttagaggaagggcataccgtattggtgcttaatgatagt
gattcaaacacaagtagttctagtaagctctataggtggcaacagcagctgctacagcct
ttattacaatccctacttattcctactaacggaatagtagcaacaatagattttgagatt
ttagaaaatatagcgttgtgggagacactattattacaaactatgctatcagaatatgag
cagaaaatattaagacagcgttatagtatctgcgtcagtctgtatcattatttccaatac
gtatatgaacactctaaagatatcactgatagtttaaatatttttataaaaaccataaaa
agtgctcaactgtttgaaatagttaacattaaaaacgaaataataaataatccaatagtt
tttcaaatagaaaactctttagaaagtaatgctgttgctaaaaaaaatataagcattact
ctatggctacatcgtacatggcaagctgaatatgatcttgctcgtcatattattcgaata
aaacaacaaaccattaatgaattgccaatagtacttagtcctcttttaaatgctgaacaa
aaagccgcgattcatatggcaaatcgttcagcctttagtattattacgggtggtccagga
acaggaaagacttttaccgttgcgcagttggttattgccttacaacaagctcaaaatgat
aatgaagtaggtagcgtatctagtcacgctaatcttgcacttgcagcgccaacaggtaaa
gcagcacagcgtatgcaagaatctttgcaggatgccatacaacacgcaggcgtgacgatg
caattacctgaagcgaagactattcatcgattactgggtatcggacagggcgggcgacca
cggtataatacggctaacccactaagtgaagacattgttattgttgatgaagcttcaatg
cttggggtggagatggcaaattatttagtcagtgcgataaaacctaatgcgcgacttata
ttattaggcgatgccaatcaactggctgccgttgatgctggtgcggtacttgctgactta
tgccgcattccagtattgcaagatattcataaacgccttgatgtgagtcgccgttttacg
acagaatcaggcattggtaagcttgcaagtcttattaatagcagtattactgacatgcca
gccgtttggaaattaatgcaagatgaagaaacactgagcttctatcagctatctaaccat
ctatcagagcctctctcagaaaaagaaatagccgttactaacgacaattcaataaacact
ttcagtactttaaaagtattaaaaatactactcgaaaaatatagtcattacatcaatgat
agtaaaaaaatattgatagaaactaacaccttaaaatctccctcaacagcacaatatatg
acttactttaaagaacttatgaccgtgcttaatacctttaaagtactgactgccggtcat
aatgggcgttgtggtgatcattatattaatcgctacctcagtgaacagcataaagaacaa
cttaagctaccgttatctaaatcaccttggtaccacgggcgaccagtaatgattctacaa
aataactatgaattaggtctatttaatggtgatattggtatttgtttacaaaccgaacga
ggcattctgcaagtattttttgaaaacaaaatacaaggtatcgccgtgaatatgttcagc
gatgatatgattgcaaccgcttatgctatgactattcataagtcgcaaggatcagagttt
gagcatgttgccatcagttttgatgataataacgcgcgattactcagtcaagagcttatc
tatacagcggtaactcgtgcaaaaaaacaagtgactatttttagtaccacttcggcattt
acacgtgcactgtcgacaccaacagttcggcaaacaggattaggcttacaattcgcaaac
ttggatagcgttactgaataa
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