Psychrobacter urativorans: AOC03_01765
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Entry
AOC03_01765 CDS
T04087
Name
(GenBank) exodeoxyribonuclease I
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pur
Psychrobacter urativorans
Brite
KEGG Orthology (KO) [BR:
pur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pur03400
]
AOC03_01765
DNA repair and recombination proteins [BR:
pur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOC03_01765
Archaeal homologous recombinant proteins
AOC03_01765
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
CobU
Motif
Other DBs
NCBI-ProteinID:
ALF58932
UniProt:
A0A0M4TBB9
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Position
407073..408575
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AA seq
500 aa
AA seq
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MSVSTAVPLTILHTSDWHLGRRLYGRMRYDEFVTFLNWLADTIATQQVDVLIVAGDIFDT
MTPSNRAQALYYEFLGTVSKSCCQHVVIVAGNHDSPTFLDAPSQILKFLNVHVIGTACED
VRDEVLILHDSSDLPYCIIAAVPYLRDRDVRSSGAGESMDSKDANVISGIRAHYDAVAAI
AKNHQQVLAKTHARHIPIIATGHLFAAGGSTTTDDGVRDLYVGNLGKISAEMFSPYFDYV
ALGHLHVPQRVGGREHIRYSGSPIAMGFGEARQQKQVLLVQFGAAADDVAALFNSSTSNP
STLNLPPNNKKTAAQKTANHTAASHNFIDDLFGFDDVDNIEVVQNIGSTVAEVNLLNDDK
SQMRVSALPIPCFQPLAQVSGDMQTIKATICTLTQSRSASEPIWLEVVYTGDDIVANLRE
QIAAMVDGLSCEILKIKNLSTYNKVLNQESASETLQDLNELEVFERCLLVNEVTDAQKLT
LRHAYEQIIHEIYDKDHHAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctctactgccgttcccttaactatcctgcacacctccgactggcatttggga
cgtcggctttatggacgtatgcgttacgatgagttcgtgacatttttaaactggcttgct
gacacgattgcgacccaacaagtagatgtactcattgtcgcaggtgatattttcgatacc
atgacacccagtaatcgcgctcaagcgttatattatgagtttttgggcacggtatcaaaa
tcatgttgccaacatgtggttattgtggcgggcaaccatgactctccaacctttctagat
gcacccagtcaaatattgaaatttttaaacgttcatgtcatcggtaccgcttgtgaagac
gtacgcgacgaagtgctgattttgcacgatagcagcgatttgccttattgcattattgcc
gcagtaccttatttgcgcgaccgcgatgtgcgtagcagtggcgctggcgagtcgatggac
agcaaggatgctaatgtcatcagcggtatccgcgcgcattatgatgcagtcgctgctatt
gctaaaaaccatcaacaagtgcttgcaaagacacacgctcgccatattcctattattgct
acgggacatttatttgccgctggcggcagcaccacgactgacgatggcgtacgggatttg
tatgttggcaatttagggaaaatatctgcggaaatgttcagtccctattttgattatgtg
gcgcttgggcatttgcatgtgccgcagcgcgttggcggacgtgagcatatccgctattct
ggctcacccattgccatgggttttggtgaagcgcgccaacaaaagcaggtgttattggta
caatttggcgcagcagcagacgatgtcgcggcactatttaactcttctacatctaaccct
tctacactaaatctgccgcctaataataaaaagacggcagcacaaaaaacagccaaccac
accgcggccagtcataattttatagacgatttatttggttttgatgacgtagacaatata
gaggttgtacaaaacataggaagcacagtagcagaagttaatttactaaatgacgataaa
tcacaaatgcgcgtgtccgcccttcccatcccttgttttcagcctttagcgcaagtgtcc
ggtgatatgcaaaccatcaaggcgactatttgtactctcacccagtcacgctcagcgtca
gagccgatttggcttgaggtggtttatacgggtgatgatattgttgccaatctgcgcgaa
cagatagctgccatggtggacggcttgtcctgtgagatactgaagattaaaaacctgtct
acttataataaagtgctcaatcaagagtcagcttctgaaaccttgcaagatttaaatgaa
ttggaagtattcgaacgctgtttattggtcaacgaagtcactgacgcgcaaaaactgacc
ttacgccatgcttacgagcaaattattcatgaaatttatgataaagaccatcacgcagaa
taa
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