Psychrobacter urativorans: AOC03_04115
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Entry
AOC03_04115 CDS
T04087
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pur
Psychrobacter urativorans
Pathway
pur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOC03_04115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pur03400
]
AOC03_04115
Enzymes [BR:
pur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOC03_04115
DNA repair and recombination proteins [BR:
pur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOC03_04115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
AAA_22
nSTAND_NTPase5
PIF1
AAA_16
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALF60738
UniProt:
A0A0M5MK56
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Position
945675..948032
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AA seq
785 aa
AA seq
DB search
MLSHTSFPNILLFLIINLSNHARQLTRVMLVQVALPVPLYRVFDYSVSTDASALPTPVLP
EIGSRVEVSFGRQTLIGIVIAHINEADSSVPINKLKPINQCLDDAPILDELMLTLASWLA
RYYHYPLGDVLSVMLPTLIRQGKPLDLLITHWRILANVNDDDFHANANKQKQQFNMLKLH
GKHGASEEVLLLEGMQRSFLTTLEDKGLIERYIQPKTAPKPVSLAKMPLDLNNEQKIAVD
AILEAHSAGRYSGFLLNGITGSGKTEVYLQAMQAVLEAGQQVLILVPEIGLTPQTRARFA
SRFAAQIVLLHSGMSNTYRMQGWQDCRTGHAQIIIGTRSAVLYPFANLGLIIVDEAHDAS
YKQQDTLRYHAADVALYRGLQYRIPVVLGTATPTLEHLKLVHDGKLIECQLRTRAGSAKL
ATMQLIDARLQPTHQQPQDDGARYDTGLTDKLIGAIRQTLEAGDQVLIFLNRRGYAPVLL
CEACGWQADCPRCDAHLTVHYSNQAHYHSYLKCHHCDWQAYIPAVCPDCGSQNLDAKGMG
TTRLSENLHAIFANPQTSKNLYPIIQIDRDTTRRKDSWEKIYQQINQGKPAILVGTQMVA
KGHHFPNVTLVCLPNADRGFLSADFRSPEHTAQLMIQVAGRAGRGDKVGHVLIQTLQPDN
PLLLKLVKDGYLPFAQELLQERKMMGLPPYSHAALIRCEGKTLAATTQALKDAISLLPAA
HNLAVLGPIDAPMSKKNSRYHSQLLLLAKDRNQLHHVLNQWWQPVLALPNVKYLKLTLDI
DPVGW
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atcctgagccatacttcttttcctaatatcttattatttctaattattaatctttctaat
catgcgaggcagctaacgcgcgttatgttggtacaagtggctttacccgttcccctttat
cgtgtatttgactatagcgtgtcaacagatgcgagcgcgttacccacgcctgtcttacca
gaaatcggcagtcgcgtcgaagtttcttttggacggcagaccttaatcggtattgtcatc
gctcatattaatgaagccgatagcagcgtccctattaataagctaaaacccatcaatcaa
tgtttagatgatgcgcctatcctagatgagcttatgttaacgttggcatcgtggctagcg
cgttattatcattatccgctcggtgatgtgttgtctgtcatgttgccaacgttaatacgc
caagggaaaccgctggatttattgattacccattggcgcattttagcaaacgtcaatgat
gatgattttcatgccaatgccaataagcaaaaacagcagtttaatatgcttaaattgcat
ggtaagcacggggcaagcgaagaggtattattattagaagggatgcagcgttcattttta
accactttagaagataaaggcttaattgaacgctatatccaaccgaaaactgcgcccaaa
cctgtcagcttagcgaaaatgccgcttgaccttaacaatgagcaaaaaattgccgttgac
gctattcttgaagcgcacagcgcaggtcgttatagcggatttttattaaacggtattact
ggtagtggtaaaacggaagtctatttgcaagcgatgcaagcagttttggaagccggtcaa
caggtcttaatcttagtgccagagattggacttacaccgcaaacacgagcgcgctttgcc
agtcgttttgccgcacagattgtgttattacattcaggcatgagtaatacttaccgcatg
caaggttggcaggattgccgaacgggacacgcgcaaatcatcattggaacacgctcagcc
gtgctctatccttttgccaatttaggattaattatcgttgacgaagcccatgatgcctct
tataaacaacaagataccttgcgctatcatgccgctgatgtagcgctatatcgcggtcta
caatatcgtattcctgtcgtgctcggtaccgcaacccctactcttgaacatctaaaactg
gtgcatgatggcaaattaatagaatgccaattgcgcacgcgggcgggcagtgccaagctt
gccacgatgcagcttattgatgctcgcctgcaacctacgcaccaacaaccacaagatgat
ggcgcacgttatgatacggggctaacggataagctgattggtgcaatacggcaaacgtta
gaagcgggcgatcaggtattgatatttctcaataggcgtggctatgcgcctgttttgcta
tgtgaggcgtgcggttggcaagctgactgtccacgctgcgatgcgcatttgaccgtgcat
tatagcaatcaggctcattatcactcttatttaaaatgccatcattgtgattggcaggct
tatattcctgcggtttgtcctgattgtggcagtcaaaatttagatgctaaaggtatgggc
accacacggctaagcgaaaatctccatgcgatttttgctaatccgcaaaccagtaaaaac
ctgtatcccattattcaaattgaccgtgataccacacgtcgtaaagacagttgggagaag
atttatcagcagattaatcaaggtaaaccggcaatcttagtcgggacgcaaatggtggct
aaaggacatcatttccccaacgttaccttagtgtgtttacctaatgccgaccgtggattt
ttatccgctgactttcgctcacctgaacacaccgcgcagctaatgattcaagtggcaggg
cgtgctggacgcggtgacaaagtaggtcacgtcttgattcaaaccctacagcctgataat
ccattattattaaaactggtcaaagacggctatctgccctttgctcaagagttactgcaa
gagcgcaaaatgatggggttgccgccttatagccatgccgccttgattcgctgtgaaggt
aaaacattagctgccacgacccaagcattaaaagatgctatttctctgttgccagccgcg
cataatttagcggtacttggtcctattgatgcgcccatgagtaaaaagaacagccgctat
cattcacagctattattattggctaaagaccgcaaccaactacatcatgttttaaatcaa
tggtggcaacccgtacttgccttacccaatgtgaaatacctcaagcttactttggatatt
gatcctgttggttggtag
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