KEGG   Psychrobacter urativorans: AOC03_08520
Entry
AOC03_08520       CDS       T04087                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pur  Psychrobacter urativorans
Pathway
pur03030  DNA replication
pur03410  Base excision repair
pur03420  Nucleotide excision repair
pur03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AOC03_08520
   03410 Base excision repair
    AOC03_08520
   03420 Nucleotide excision repair
    AOC03_08520
   03440 Homologous recombination
    AOC03_08520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pur03032]
    AOC03_08520
   03400 DNA repair and recombination proteins [BR:pur03400]
    AOC03_08520
Enzymes [BR:pur01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AOC03_08520
DNA replication proteins [BR:pur03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AOC03_08520
DNA repair and recombination proteins [BR:pur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AOC03_08520
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOC03_08520
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2 HHH T3S_SPI-1_N0 IMS_HHH
Other DBs
NCBI-ProteinID: ALF60829
UniProt: A0A0M4TGY5
LinkDB
Position
complement(1992669..1995626)
AA seq 985 aa
MTDNAHNSHLPINPDTVPSFETMTNVATMDTSHVNKDTPPFILVDGSYYLFRTYHALPKM
MTTTGQHTNAIRGTLNALLKLMRRYHPTHMAVCFDTRAPTFRHQLSADYKASRPPMDIEL
SQQIPYLHRLVTALGIPLLRIEGAEADDIIGTLAYRAVAEGHHVVISTGDKDMAQLVNDC
VILEDSFTGKITDSQGVVDKFGINPEQMIDFLTLMGDSSDGIKGVPGIGKKTAQDLLNKY
GTIDNILQNLADVKGRGAKSLAEHAGDIPLNAQLATIVTDLDIGQDWSDLQLNTDPCAHV
DELRALYSELEFKNELASLDHPNHPANGQGSKGVAASQAATEAQAQIEKSLQSTKIDNIK
NSKNHDKAWHTILDMPAFDSLIEQLENSAHFVIDTETTSVHWRQAELVGLSFATQAHEAY
YIPLAHSLEGDALTTKQLDRDTILSRLKPILENPNIGKIGQHLKYDAHILSRYDIDLLGS
IHDKPNNWAMDTMLASYVINAAITRHGMDDLARHYLQTQTISFEDVAGKGAKQVSFDQVA
IDIASDYACEDADITYQLFKIFNQKLANDDNNQKLLHELEIPTAEILCQMEAEGILIKRP
FLNELSKRFDEEIIVLEQRAYEVAGEEFNLASPKQLGEMLFDKLGVIGGKKTKTGQYSTG
EAVLSKIDHPLVDIVLEYRSLAKLKNTYTDALDNVADPITNRVHTSYHQALTSTGRLSST
DPNLQNIPIRTATGRLIRQAFIAPEGRVILAADYSQIELRLMAHFSGDENLTRAFNEGLD
IHTATAAEVLGKTVEEVTPTERRNAKAINFGLLYGMSAFGLAKQLQMSRGEAQDYINMYF
NRYPSVKEYMINTRASAYDKGYVETILGRKLYTPDINNSNRMVKQAAERAAINAPLQGSA
ADIIKLAMIAVDKVLPKAQAKMLLQVHDELVFEVDADKAADISKLIKNAMQEVLSTTAVA
SGWQVDFAVPLLVETDIGSNWDEAH
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgacagataatgcccacaactctcacctaccgattaatcccgatacggtgccaagcttt
gagacgatgacgaatgtagccacgatggataccagtcatgtgaacaaagacacgccgcca
tttatcttagttgatggttcgtattatctgtttcgcacttatcatgccttaccgaaaatg
atgaccaccacagggcaacataccaatgcgatacgcggtacattaaacgcgctgctcaag
ctgatgcgccgttatcatcccacccatatggcggtctgttttgatacgcgcgcgccaacg
tttcgtcatcaattatccgctgattataaagccagtcgtccgccgatggatattgaactg
tcacagcaaatcccttatttgcaccgtttagtcaccgctttgggcattcctttattgcgt
attgaaggcgcagaagctgatgatattatcggcacgttggcatatcgggcggttgccgaa
ggtcatcacgtcgttatctcaactggtgataaagacatggcgcaactggtcaatgattgc
gtgattttagaagacagtttcacaggaaaaatcaccgatagccaaggcgtagtcgataaa
tttggtatcaatcctgagcaaatgattgattttttaacgctgatgggtgactcatcagac
ggcatcaaaggcgtacccggtattggtaaaaagaccgcgcaagacttgcttaataaatat
ggcactattgataatattttgcaaaatcttgccgatgttaaaggtcgcggtgcaaaaagt
ttggctgaacatgctggtgacattccgttaaatgcgcaacttgctaccatcgtgacggac
ttagatatcggtcaagattggagtgacttacagcttaataccgacccttgcgcccatgtt
gacgagttacgggcactatatagcgagcttgagtttaagaatgagctggcgtcgctcgac
catccgaatcatccggcaaatggtcaaggcagcaaaggcgttgccgccagccaagcagca
acggaagcacaagcccaaatcgaaaaatcattgcaatcaaccaaaattgataatatcaaa
aacagtaaaaatcacgataaagcatggcatacgatattggacatgcctgcctttgatagt
ttaattgagcaattagaaaactcagcgcattttgttattgataccgaaaccaccagcgtg
cattggcgtcaggctgaattggtcggcttatcttttgcaactcaagcgcacgaagcttat
tatattccgctagcccatagcttggaaggtgatgcgctcacgactaagcagcttgaccgt
gatacgatattatctcgtctaaagcccattttagaaaaccctaatatcggtaaaattggt
caacatctgaaatatgatgcgcatattctcagccgttatgatattgatttactgggcagt
attcatgataagccgaataactgggcaatggataccatgcttgccagctatgtgattaat
gccgccattacccgtcatggcatggatgacttggcgcggcattatctgcaaacgcaaacg
attagctttgaagatgttgccggtaaaggtgcgaaacaagttagctttgatcaagttgcc
attgatattgctagcgactatgcgtgtgaagatgccgacattacctatcaactattcaag
atttttaatcaaaaattggctaatgatgacaataatcaaaaactactgcatgagctagaa
attccaaccgctgaaattctgtgtcaaatggaagccgaaggtattttgattaagcgtccg
tttttaaatgaactgtcgaagcgttttgatgaagaaattattgtactggaacaacgcgct
tatgaggttgccggtgaagaatttaacttagcgtcgcctaaacagcttggtgagatgctc
tttgataaattgggcgtcattggcggtaaaaaaaccaagaccggtcagtattcaacgggc
gaagcggtactgtccaagattgaccatccactggtggatatcgttctagaatatcgcagc
ttggcaaagttaaaaaacacctataccgatgcgctcgataatgtcgcagaccctatcacc
aatcgcgtgcataccagttaccatcaagcattgaccagtacgggtagattatcttctact
gatcccaatttgcaaaatatcccgattcgtaccgccacggggcgtttgattcgccaagcc
tttattgcaccagaaggtcgcgtgatattagcggcggattattcacaaattgagctgcgt
ttgatggcgcatttctcaggcgatgaaaatctaacccgcgcctttaatgaaggattggat
attcacactgctacagcggctgaagtgttgggcaaaacggttgaagaagtcaccccaact
gagcgccgcaacgccaaagccattaactttggtttgctttatggtatgagtgcctttgga
cttgccaagcaattacagatgagtcgcggtgaagcacaagactatatcaatatgtatttt
aatcgttacccgagcgtcaaagaatatatgataaatacgcgagcgagtgcgtatgataaa
ggctatgttgagactatcctcggtcgtaagctctacacgcccgatattaataatagcaat
cgtatggtcaagcaagccgcagaacgtgcagccattaatgcgccattacaaggctcagcc
gctgatattattaagctcgcgatgattgccgttgataaagtattgccaaaagcgcaggca
aaaatgctactccaagttcatgatgaattggtatttgaagtggacgcagataaagcggct
gatattagcaagcttattaaaaatgccatgcaagaagttttatcgacaaccgccgttgct
agcggctggcaagtggactttgctgtgccgctgttagtagaaaccgatatcggtagcaat
tgggacgaggcgcattaa

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