Psychrobacter urativorans: AOC03_08905
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Entry
AOC03_08905 CDS
T04087
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pur
Psychrobacter urativorans
Brite
KEGG Orthology (KO) [BR:
pur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pur03016
]
AOC03_08905
Enzymes [BR:
pur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AOC03_08905
Transfer RNA biogenesis [BR:
pur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AOC03_08905
Prokaryotic type
AOC03_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALF60834
UniProt:
A0A0M4T9P8
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All DBs
Position
complement(2085644..2086762)
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AA seq
372 aa
AA seq
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MPQPTLPPITQATYKACAKDFVVNEILPNTFTGEGEHLWLHIQKMSMNTAYLAKLLAEWA
DIPLRDVGYSGLKDRHALTTQWFSLRIPKKQLPPTIFAPVDLGNDESVEILAQHWHNKKL
GRGAHRANQFIITLRDVQLADSILDAQQQLITQQKIAQHLAHISQMGVPNYFGPQRFGHG
GNNIKEALRLFAEPQKDKTKNQAKNKRKRSPQEHHTMALSAARSLIFNEILAVRVRDGSW
NTGIAGEVFNLNGSGSIFASEEMDDSLRARLIAGDIHPTAPLWGLENNKVSGAAAALEND
VVQQNPVLMQLATGLMQRDIKAQRRALRLPIEDLKWEWQDAQTLILCFSLPTGSFATSVL
ANLVQQLQMRSA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcaaccaactctaccacctatcacacaagcaacttataaagcctgcgccaaagac
tttgtggttaatgaaatcctgccgaatacctttactggcgaaggcgaacatttatggtta
cacatacaaaaaatgagcatgaataccgcatatcttgctaaattactagccgaatgggcg
gatattccactgcgcgatgtgggttattcaggattaaaagaccggcatgccttaaccacg
caatggtttagtttacgcattcctaagaagcaattaccgcccactatttttgcgccagtt
gaccttggtaatgatgaaagcgtagagatactggcgcagcattggcacaataaaaaactg
ggacgcggggcgcatcgtgccaatcaatttatcattaccttacgtgacgttcagttggca
gacagtattttagatgcgcaacagcagctcattacacaacaaaaaatagcccaacattta
gcacatatcagtcaaatgggtgtacccaattattttggtccacagcgttttggtcatggc
ggtaataatattaaagaagcgctaagattgtttgctgaaccgcaaaaggataaaactaaa
aaccaagctaaaaataagcgtaaacgttcgcctcaagaacaccatactatggcattgtct
gccgcccgcagtttaatatttaatgagattttagcggtgcgagtacgtgatggcagctgg
aatacaggtattgccggagaagtatttaatttaaacggctcaggttcaatattcgccagt
gaagaaatggacgatagtttacgcgccagactgattgcaggcgatattcatccaaccgcc
ccattatggggactagaaaataataaagtgagtggtgcggcagcagcgctagagaatgac
gtggtacagcaaaacccagtattaatgcagctagcaacaggtcttatgcaacgtgatatt
aaggcgcaaagacgggctttacgcttaccgattgaggatttaaagtgggaatggcaggac
gcgcaaaccctaatattgtgctttagcttaccaaccggcagctttgccaccagtgtgttg
gcaaatttggtacaacagttacaaatgcgctcagcttaa
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