KEGG   Psychrobacter urativorans: AOC03_10840
Entry
AOC03_10840       CDS       T04087                                 
Name
(GenBank) integration host factor
  KO
K05788  integration host factor subunit beta
Organism
pur  Psychrobacter urativorans
Brite
KEGG Orthology (KO) [BR:pur00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pur03032]
    AOC03_10840
   03036 Chromosome and associated proteins [BR:pur03036]
    AOC03_10840
   03400 DNA repair and recombination proteins [BR:pur03400]
    AOC03_10840
DNA replication proteins [BR:pur03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AOC03_10840
Chromosome and associated proteins [BR:pur03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    AOC03_10840
DNA repair and recombination proteins [BR:pur03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      AOC03_10840
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: ALF60473
UniProt: A0A0M3V978
LinkDB
Position
2523969..2524274
AA seq 101 aa
MQQAINKSDFINNLSANCDTITDMVIDDAVREILNLMIDTLAKDGRVEVRGFGSFCLHHR
RARTGRNPKTGESVPVPAKAIPHFKPGKALREAVNDNVALS
NT seq 306 nt   +upstreamnt  +downstreamnt
atgcaacaagctattaataagtccgactttattaacaatttgagtgctaactgtgacacc
ataactgatatggttattgatgatgccgtacgcgaaattctaaacctaatgatagacacc
ttggcaaaagatggccgtgtggaagttcgtggttttggcagtttttgcttacatcatcgt
cgtgcacgcacaggacgtaatccaaaaacaggtgagagtgtgccggttcctgctaaagcg
attccgcatttcaagccaggcaaggcgttacgagaagccgtcaacgataatgtcgcgtta
tcataa

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