Pollutimonas thiosulfatoxidans: CKA81_04075
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Entry
CKA81_04075 CDS
T05795
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pus
Pollutimonas thiosulfatoxidans
Pathway
pus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKA81_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pus03400
]
CKA81_04075
DNA repair and recombination proteins [BR:
pus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKA81_04075
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKA81_04075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QAA93108
UniProt:
A0A410G9W6
LinkDB
All DBs
Position
837983..840004
Genome browser
AA seq
673 aa
AA seq
DB search
MNAPAPGFINYPNSPFQLYRPYPPAGDQPTAIDALVEGINDGLMYQTLLGVTGSGKTYTM
ANVIARTGRPAIVLAPNKTLAAQLYAEMREFFPNNAVEYFVSYYDYYQPEAYVAARDLFI
EKDSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVLTLRTGDRIAR
QELLGRLVAMQYERNDVEFVRGVFRARGEIIDVFPAEHAELALRITLFDDEIESLQMFDP
LTGKINRSIPRFTVFPSSHYVTPRETVLRAIETIKVELRERLAVLIADGKLVEAQRLEQR
TRFDLEMLQELGFCKGIENYSRHLSGAAPGDPPPTLIDYLPRDALMFIDESHVTMGQLSA
MYRGDRSRKSTLVQFGFRLPSAMDNRPLQLEEFEQRMRQCVFVSATPANYENEHTDNVVE
QVVRPTGLVDPLVEVRPALTQVDDLLGEIKKRVAVQERVLVTTLTKRMSEDLTDYLAEHG
TKVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLR
SERSLIQTMGRAARNINGRAILYADRITDSMRRAMGETERRRLKQLEFNEVHGITARGVS
KAVREMIDGVMVPAEPSVLDDISPEVLRDDKALAKEIRRLEKLMMDHAKNLEFEQAANAR
DALNRLKHKALMS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccagcaccaggtttcatcaattatccgaacagcccctttcagttgtacagg
ccttatccgccggccggcgaccagcccacggccatcgatgcgctggtcgaaggcatcaat
gacggtctgatgtaccaaacgctattgggcgtgaccggctccggcaagacctacaccatg
gccaacgtcattgcgcgcaccggccgcccggccattgtgctggcgcccaacaagacactg
gcggcgcagctgtatgccgagatgcgtgaattctttccgaacaacgccgtcgagtacttc
gtgtcgtactacgactattaccagcccgaagcctatgttgcggcgcgcgatctgttcatc
gagaaggactcgtccattaacgagcacatcgagcagatgcgcttgtcggccactaaaagc
ttgctggagcgccgcgacaccatcattgtcggcacagtgtcttgcatctatggcataggc
aatccgggcgactaccacgccatggtgcttaccctgcgcaccggcgaccgcatcgcgcgt
caagagctcctgggccggttagtggcgatgcagtacgagcgcaacgatgtggagttcgtg
cgaggcgtgtttcgggcccgcggcgagatcatcgatgtcttcccggcggagcacgctgaa
ctcgccttgcgcattaccctgtttgatgacgagatcgagtccttgcaaatgttcgatccg
cttaccgggaagatcaaccgcagcattccccgttttaccgtcttccccagctcgcattac
gtcaccccgcgcgagaccgtactgcgcgctatcgaaaccatcaaggtggaactgcgcgaa
cggctggcggtgctgattgcagacggcaagctggtcgaggcacagcgactggagcagcgc
acgcgtttcgacctggaaatgctgcaggaactcggcttttgcaagggcatcgagaactat
tcccggcacctgtccggcgccgcgccgggcgatccgccacccacgctcatcgactacctg
ccgcgtgacgccttgatgttcatcgacgaaagccacgtgaccatggggcagctaagtgcc
atgtatcggggcgatcgttcgcgcaagtcgacgctggtgcaatttgggtttcgtttgccg
tccgcgatggacaatcggcccttgcagctggaagagttcgagcagcgcatgcggcaatgc
gtatttgtttcggccacgccggccaactacgagaacgagcataccgacaacgtggtcgag
caagtggtgcggcccaccggcctggtcgaccccttggtggaagtgcgtccggcgctgacc
caggtcgacgatctgcttggcgagatcaagaagcgtgtagcggtacaggagagggtgctg
gttactacgctgaccaagcgcatgtcggaagaccttaccgattatctggccgagcacggc
accaaggtgcgttatctgcattccgacatcgacaccgtagagcgcgtggagatcatccgc
gatttgcgcttgggggtgtttgatgtgctggtgggcatcaacctgctgcgcgaaggcctg
gacatcccggaggtgtcactggtggcgattcttgatgccgacaaggaaggttttctgcgt
tcggagcgcagcctgattcaaaccatggggcgggccgcacgcaacatcaatggacgcgcc
attctttatgccgaccgcattaccgactcgatgcgacgcgccatgggtgaaaccgagagg
cgccgtctgaagcaactggagttcaacgaagtccacggcattacagcgcgcggcgtcagc
aaggccgtgcgcgagatgattgatggtgtcatggtgcctgcggagccgtcggtgctggac
gatatctctccggaggtgctgcgcgacgataaggcgttggccaaggaaatccggcgtctt
gaaaaactgatgatggaccatgcgaagaatctggaattcgaacaggcggccaacgcccgc
gatgcgctgaatcggctgaaacacaaggccttgatgtcttga
DBGET
integrated database retrieval system
