Pollutimonas thiosulfatoxidans: CKA81_05385
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Entry
CKA81_05385 CDS
T05795
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pus
Pollutimonas thiosulfatoxidans
Brite
KEGG Orthology (KO) [BR:
pus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pus03032
]
CKA81_05385
03400 DNA repair and recombination proteins [BR:
pus03400
]
CKA81_05385
Enzymes [BR:
pus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CKA81_05385
DNA replication proteins [BR:
pus03032
]
Prokaryotic type
DNA Topoisomerases
CKA81_05385
DNA repair and recombination proteins [BR:
pus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKA81_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QAA93329
UniProt:
A0A410GAJ4
LinkDB
All DBs
Position
1108155..1109183
Genome browser
AA seq
342 aa
AA seq
DB search
MTDELVYIGEDAPGITRHRVGKGFRYVDAAGRRITDAQTLARIRALAIPPAYEQVWICAD
PRGHIQATGRDARGRKQYRYHEVWKRIRDADKYQQLEAFGTALARIRRKVARDLAGPAMT
PERVIAIVVRLLELTLIRVGTPRYAVANKSFGLTTMRRRHARVAGSTVRFKFRGKSGIEH
DVTVRDRRIARLVKRCMEIPGQELFQYIDETGTVRRVESGLVNAYLKEAGGGDFTAKHYR
TWAASVYAFSQLQRRSAAQERPLNKTVNEVLKETAARLGNTPKVCRDCYVHPAVISTYLE
GKLPQRLAVKSPAGLRADEWRFLQFLRACELPPDPTVPEQKV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagctggtctacattggggaagacgcccccggtatcacgcgccacagggta
ggcaaaggttttcggtatgtggatgcggccggacggcgcatcaccgatgcccaaacgctc
gcccgtatccgcgccttggccattcccccggcatacgaacaggtctggatctgtgcggac
ccccgcggtcatatacaggccaccggacgcgatgccaggggacgcaagcaataccggtat
cacgaggtatggaaacgtatacgggatgccgacaagtaccagcagcttgaggcattcggc
actgccctggcacgtatccgccgcaaggtggcgcgcgaccttgcaggcccggcaatgacg
cccgagcgcgtgattgccattgtcgtgcgcttgctcgaactgactttgattcgcgtcgga
acaccacgctacgcggttgccaacaagtcgtttggcctgacgactatgcgcaggcgtcac
gcccgggttgcgggatcgacggtgcgtttcaagttccgcggcaaaagcggcatcgagcac
gatgtgacagtcagggatagacgcatcgcccggctggtaaagcgctgtatggaaattccc
ggccaggaactgttccagtacatcgatgaaacgggcaccgtccgccgggtggagtccggc
ctggtcaatgcctatttgaaagaggcgggcggtggcgacttcacggccaagcactatcgg
acctgggccgccagcgtgtacgcgttcagccagcttcaacggcgcagtgccgcgcaagag
cgcccgctgaacaagaccgtcaacgaggtcttgaaggaaactgcagcacgcctgggcaat
acgccgaaggtatgtcgagactgttatgtacatcccgcggtcatcagcacttatctggaa
ggtaagctgccgcagcgtctagcggtgaagtcgccggcgggactgcgcgccgacgaatgg
cgcttcttgcaattcttgcgggcatgcgagttgccgcccgatccgaccgtacccgaacaa
aaggtgtag
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