Pollutimonas thiosulfatoxidans: CKA81_13980
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Entry
CKA81_13980 CDS
T05795
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pus
Pollutimonas thiosulfatoxidans
Pathway
pus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKA81_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pus03019
]
CKA81_13980
Enzymes [BR:
pus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CKA81_13980
Messenger RNA biogenesis [BR:
pus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CKA81_13980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
HI1480
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QAA95637
UniProt:
A0A410GH55
LinkDB
All DBs
Position
2861459..2862862
Genome browser
AA seq
467 aa
AA seq
DB search
MRAVTETGYEHPTPIQAQAIPQVLKGGDLLAAAQTGTGKTAGFTLPILHRLLTNPLQTRK
PGQPRVLILTPTRELTAQVEESVRTYGKHTTIRSMVMFGGVNINPQINALRKPLDILVAT
PGRLLDHAQQKTVDLSAVEILVLDEADRMLDMGFIRDIRRILALLPKQRQNLLFSATFSD
EIRQLSKGVLNNPIEISVARRNTASELVSQSMVLTEQSHKRDLLSYIIRESGWHQVLVFT
RTKHGANRLAEKLVKDGLAAAAIHGNKSQAARTRALAGFKDGKVAVLVATDIAARGIDID
QLPHVVNFELPNVPEDYVHRIGRTGRAGTEGSAMSLVDKSEIKLLTAIEKLINRPIERTT
IKGWSVDMVKAEPAHVRADEDRPRRNNAPRGGAGNGGRGNGRPGGQRSGDARRSDGTGTR
SAAAPRGDGSAPRQAARRPAGNHAATPRPAADGGRGNTGLRAALLGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgccgttaccgaaaccggttacgaacaccctacgcctatccaggcgcaagccata
cctcaagtactgaaaggcggcgatctgctggccgcagcgcaaacgggcaccggcaagacg
gctggctttaccctgcccatcctgcaccgcttgctgacgaacccgctgcaaacacgcaag
cccggccagccccgtgtgctgatcctgacccccacccgcgagcttactgcccaggtggaa
gagtccgtgcgcacctacggcaagcacaccaccatccggtcgatggtgatgtttggcggc
gtcaacatcaatccgcaaatcaatgccctgcgcaagccgctggacatcctcgttgccacg
cccggccgcctgctagatcacgcacaacagaaaaccgtggatttgtctgccgttgaaatt
ctggtgctggacgaagccgatcgcatgctggacatgggcttcatccgcgacatccgccgc
atactggccctgttgcccaagcagcggcagaacttgctgttctcggccaccttctcggat
gaaatccgtcagttgtccaagggcgtgttgaacaacccgatagaaatttctgttgcgcgt
cgcaatacggcttccgaacttgtttcgcaaagcatggtgctgaccgaacaatcccataag
cgtgacctgctcagctacatcatccgcgaaagcggctggcatcaagtgctggtgttcaca
cgcaccaagcatggcgctaaccgcctggctgaaaagctggtcaaggatgggctggcggcc
gctgccatccacggcaacaagagccaggcagcacgtacccgcgcactggccggcttcaag
gacggcaaggtcgccgtgctggttgccaccgacatcgccgcacgcggtatcgatatcgac
cagctaccgcatgtggtcaattttgagctgcccaacgttccggaagactatgtgcaccgt
atcgggcgcaccggccgcgcgggcacggagggctcggccatgtcgttggtggacaagtcc
gagatcaagctgctcactgccatcgaaaagctcatcaaccgccccatcgagcgcaccacc
atcaagggatggtccgtcgatatggtcaaggccgaacccgcacacgtgcgagccgatgag
gaccgcccccgccgcaataatgcgccccgtggcggcgccggcaacggtggtcgcggcaat
ggccgccctggcggtcaacgctccggcgatgcacgacgcagcgacggcaccggcacacgt
tctgctgcggcgccgcgtggcgacggctcggcgcctcgccaagcggcccgccggcctgcc
ggcaaccatgctgccaccccgcgtccggctgccgatggcggccgtggcaacacgggtttg
cgcgccgcgctgctgggtaagtaa
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