Pusillimonas sp. T7-7: PT7_0502
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Entry
PT7_0502 CDS
T01486
Name
(GenBank) putative ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
put
Pusillimonas sp. T7-7
Brite
KEGG Orthology (KO) [BR:
put00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
put03019
]
PT7_0502
Enzymes [BR:
put01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PT7_0502
Messenger RNA biogenesis [BR:
put03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PT7_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
NACHT
T2SSE
nSTAND_NTPase5
SRP54
SLFN-g3_helicase
PhoH
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEC19042
LinkDB
All DBs
Position
582121..585993
Genome browser
AA seq
1290 aa
AA seq
DB search
MQAPVNLSENTHTSNTADGHKGRQNSGQRRPASRPDRPLPPLHYPEDLPVSSRRADIAKA
IQDHQVVIVCGETGSGKTTQLPKICLELGRGRQKMIGHTQPRRLAATSVAKRIAQELGTE
LGDWVGYQIRFNDRTGPNAAVKLMTDGILLAESQRDPLLRRYDTIIIDEAHERSLNIDFL
LGFLLQLLPKRRDLKLIITSATIDANRFAQHFAQHGRPAPVIEVSGRLYPVDILYRPVLR
EGAGPGEEAGARRQTADEERDLIDAVVDGVAECARHGPGDVLVFLPGEREIRETVEALRK
SHPPATEVLPLYARLSQAEQERIFRPQGNARRIVLATNVAETSLTVPGIRYVVDSGLARV
KRYSWRNKVEQLRIEAISQASANQRAGRCGRIGPGVCVRLYDEADFKQRAPFTDPEVLRS
SLASVILRMKALKLDDIETFPFVDRPPGRAVADGYHLLQELGAIDEQNQLTDVGQTLSRL
PVDPRLARMILAAKDLQCLNEILIIASALSVQDPRDRPMQEREASEAAHAKFGDDKSEFI
SYLKLWRWYGEQVEHKASQRKLVALLRQNFLSPLRLREWRDVHSQLAALVGEQGWRLNTL
DATYEQTHMALLAGLLGNIGLKSEDTNVYQGARDIRFHIHPGSRLVKKAGRWLVAAELVE
TTRLYARCVARIDPAWLEKAGSHLIRRSWSDPRWEKKAGQVVANERATLYGLPVYTGRRV
HFGKIDPVQARELFIRQALVPGELDTPLPFLKHNRQLIASIEKLEHQTRRPDILVDDALI
YAFYEQHIPADICQTATLEKWHKSLSKEQARTLLLTRDALMRHDAAGITTDVFPKSVDWQ
GVTMALDYHFEPGSVRDGVTLTVPLFALNQIDPLRCEWLVPGMLKEKTHLLLKSLPQKMR
RHCVPLPDYAAGFVDRWFERAAHPDRGLLEAIGADMWEQVKVRPLRSDFKPENLPAHLFM
NFKVVDEHGRMLSGGRNLDQLKAEHGRQAQASFQKVAARDDQIAQALAHEKLTDWTFGPL
PEIMEIKRKGQSFIGYPALVDKQTHCDLDVFDDPEQARQQHHAGLLRLFRLALREQVKFQ
EKNISDLTRMSMLYMSLGTQEELRQQIIDCALDQACLAEPWPTDQQGFEQRRNEGKARLG
LLVQEIARLAGQVLAEWSSLQKKLPQAKPHAAAYADLQKQQGGLMEKWFLRNTAYGQLKH
YPRYLKGAQVRIDKLRADPVRDARLMGEMAPLLVQYQRAVSGLKGARDARLEEFRWLLEE
LRVALFAQELRTPMPVSVKRLQKAWSAMQR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgccagttaatttgtcggaaaacacacacaccagcaacaccgcggatggccat
aagggccggcaaaatagcggccagcgcaggccggcgtcccggcccgacaggcctttgccg
ccgctgcactatcctgaggacttgccggtcagctcgcgacgcgccgatattgccaaggcc
atacaggaccatcaggtggtcattgtttgcggtgaaaccggctcgggaaaaacgacgcag
ttgccgaaaatctgccttgagcttgggcgtggccgccagaagatgatagggcacacacag
ccgcggcggctggccgccacgtcggtggccaagcgtattgcccaggaattgggtactgaa
ctcggtgactgggtgggctaccagattcgtttcaatgaccgtaccgggcccaatgccgcc
gtcaagctgatgacagatggcattttgctggccgagtcgcaacgcgacccgctgctgcgc
cgatacgacacgattattatcgatgaagcccatgagcgcagtctgaatattgattttctg
ctgggctttcttttgcagctattgcccaagcgccgcgacttgaagctcatcatcacctcg
gccaccatagacgccaaccgctttgcccagcattttgcgcagcacggtcggccggcacct
gttatcgaggtgtccggacgtttgtatcccgtcgatattctgtaccggcccgtgctgcgg
gaaggcgctgggccgggtgaagaggcgggtgcccgtcgccagacagctgacgaagagcgt
gacttgatcgatgcggtggtggatggcgtggcggaatgcgcccggcatggtccgggcgat
gtgctggtttttctgcccggcgagcgtgaaatacgcgaaaccgtcgaggccttgcgcaag
agccatcctcccgctactgaagtgctgcctttgtatgcccgcctgtcccaggctgaacaa
gagcgcattttccgaccgcagggcaatgcgcggcgcatagtgcttgccaccaatgtggcc
gaaacgtccttgactgtgccaggcatacgttatgtggtcgacagcggtctggcacgtgtc
aagcgctattcctggcgcaacaaggttgagcagctgcgtatcgaggccatcagccaggca
tcggccaatcagcgggcagggcgttgcggccgcatcgggccgggcgtgtgtgtacgtctt
tacgacgaagctgattttaagcagcgagcgccttttaccgatccggaagtgctgcgctct
tcgctggcttcggtgatactgcgcatgaaggcgctgaagctggacgatatagaaaccttt
ccttttgttgaccgtccgccagggcgggcggtggccgatggctatcatttgctgcaggag
ctgggcgccatcgacgagcaaaaccagttgaccgacgtgggacagacgctgtcgcgcctg
ccggttgatccacgcctggcgcgcatgatactggctgcgaaagatctacaatgtttaaac
gaaatactgattatcgcttcggccttgtcggtacaagacccgcgtgaccgacccatgcag
gagcgtgaggcttccgaggcggcccatgccaagttcggcgacgacaaatccgagtttatc
tcttacctgaaattgtggcgctggtatggcgagcaagtcgagcacaaggcatcgcagcgc
aagctggtggccctgttgcgccaaaacttcctgtcgcctttgcggctgcgtgaatggcgt
gatgtgcatagccaactggccgcgctggtgggagagcaaggctggcgcctgaacacgctg
gatgccacctacgagcagactcatatggccttgctggctggcctgctgggcaatataggt
cttaaaagcgaggatacaaacgtttaccagggcgcgcgcgacatacgcttccatatacat
cccggttcccgcctcgtgaagaaagcgggccgatggctggttgcggccgaactcgtggaa
accacccgtttgtatgcacgctgtgtggcgcgcatagaccctgcctggctggaaaaagcc
ggttcgcacttgatacgtcgcagctggtctgatccccggtgggagaaaaaagcagggcaa
gtcgtggccaacgagcgggctacgttgtatggtttgcccgtttacaccggcaggcgggtg
cattttggcaagattgatccggtccaggcacgggaactgttcatcaggcaggcgctggta
cccggcgagctcgatacgcccttgccttttttgaagcataaccggcagcttattgcctct
attgaaaagctggagcatcagaccagacgacctgacattctggtggatgatgcactgatc
tacgcgttttatgagcagcacatccccgctgacatctgccagacggcgaccctggaaaaa
tggcataaaagcctgagcaaagaacaggcccgaaccttgctgctgacacgcgatgcgctg
atgcgtcacgatgcggccggtataacgaccgatgtgtttcccaagtcggtagactggcag
ggcgtgacgatggcgctcgactatcattttgagcctggttccgtacgcgatggggtcacg
ctgaccgtccccttgtttgcgctgaaccagatcgatcccttgcgctgtgagtggctggtg
ccaggcatgctcaaggaaaaaacacatttgctattgaagtctttgccgcaaaaaatgcgt
cgccattgtgtgcccttgccagactatgccgccggttttgtcgatcgctggtttgagcgt
gcggcgcatcccgaccggggtttgctggaggccattggcgccgacatgtgggaacaggtc
aaggtcaggccattgcgtagtgatttcaagcccgagaaccttcctgcccacctgttcatg
aacttcaaggtggttgacgagcatgggcgcatgctgtcgggcggccgcaacctggatcag
ctcaaggccgagcacggccggcaggctcaggcttcgttccagaaagtcgccgcgcgcgac
gatcagatcgcccaggcgttggcgcacgaaaagctcacagactggacattcgggcctttg
ccggaaattatggaaatcaagcgcaaggggcagtcctttatcggctatccggcgctggta
gacaagcagacccattgcgatctggatgtgtttgatgatcccgagcaggcacgccagcag
catcatgcgggtctgctgcggttgtttcgcctggccctgcgcgagcaagtgaagttccag
gaaaagaacataagcgatctgactcgcatgagcatgctctacatgagcctgggcacacaa
gaagaattgcgtcagcaaatcattgattgcgcgctggaccaggcttgcctggccgaaccc
tggcctacagatcaacaaggctttgagcagcggcgtaatgagggcaaagcccgtctgggc
ttgctggtgcaggaaattgccaggctggccggacaggtgttggccgaatggtcctccttg
caaaagaagttgccgcaagccaagccccatgccgccgcctatgccgatttgcagaagcag
caaggcgggctgatggaaaaatggtttttgcgcaacacggcgtatggtcaactgaagcac
tatcctcgttacttgaagggcgctcaggtgcgcatagacaagttacgggccgatccagtt
cgtgacgcgcgtctgatgggcgagatggcgcctttgctggtgcagtatcagcgtgcagta
tcggggttgaagggggcccgtgatgcccggctggaagagtttcgctggctgctggaggag
ttgcgcgtggcgctttttgcacaagagttgcgcacgcccatgccggtttccgtcaagcgt
ctgcaaaaagcgtggtcggccatgcaacgctag
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