Pusillimonas sp. T7-7: PT7_1430
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Entry
PT7_1430 CDS
T01486
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
put
Pusillimonas sp. T7-7
Pathway
put03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
put00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PT7_1430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
put03021
]
PT7_1430
03019 Messenger RNA biogenesis [BR:
put03019
]
PT7_1430
Transcription machinery [BR:
put03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PT7_1430
Messenger RNA biogenesis [BR:
put03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PT7_1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
S1CSD-TOTE-2
AAA_25
Mor
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEC19970
LinkDB
All DBs
Position
1549613..1550869
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AA seq
418 aa
AA seq
DB search
MHLTELKTQHVSKLLEMAAELEIDNASRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASPDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GMQPETIKHRIMFDNLTPLHPDEVMTLERNIKSEENTTGRILDIFAPMGKGQRALIVASP
KSGKTVMMQHIAHAISANYPDAIMIVMLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVELKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIGTALVETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEIEAMEFILDKIRATKTNSEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaccgaattaaaaacacagcacgtttccaagctgctcgaaatggccgccgaa
ctggaaatcgacaacgccagccgtctgcgcaaacaggaactcatgtttgccatcatgaaa
cggcgtgccaaacagggcgagcaaatatttggtgatggtgtacttgaagtattgcctgac
ggcttcgggttcttgcgttcgcctgaaacctcgtacctggccagccccgacgatatctat
atctcgccttcccagatccgccgattcaacttgcacaccggcgattccatagaaggcgaa
gtccggacgcccaaagatggcgagcgctatttcgccctggtcaaggttgacaaggtcaat
ggcatgcagcccgagaccatcaagcatcgcatcatgtttgataacctcacgcccttgcac
ccagacgaggtcatgacgctcgagcgcaatatcaaaagcgaagaaaacaccacgggccgc
attctggacatcttcgcacccatgggcaaaggccagcgcgccctcatcgtcgccagcccc
aagtccggcaagacggtcatgatgcagcatattgcccatgccatcagcgccaactatccc
gacgccatcatgatcgtcatgctggtcgacgagcggcccgaagaagtcacagaaatgcaa
cgcaccgtgcgtggcgaagtggtggcctccaccttcgacgaacccgccacacgccacgtc
caggtcgccgagatggtgatcgaaaaagccaagcggctggtcgagctcaaaaaagatgtc
gtcatcctgctcgactccatcacccgtctggcacgcgcctacaatacggtcgtaccggct
tcaggcaaggtgctgaccggcggcgttgacgccaacgcactgcagcggcccaaacgcttt
tttggtgctgcccgcaacgtcgaagaaggcggctcgctgaccatcattggtacagccctg
gtggaaaccggcagccgtatggacgaggtcatctacgaagaattcaaaggcacaggcaac
tccgaggttcacctcgagcggcgcctggccgaaaagcgtgtttatccggccatcaacctg
aacaaatcaggcacacgccgtgaagaactgcttatcaagcccgagcttctacagaaagtt
tgggtgcttcgaaagttcatacacgacatggacgaaatcgaagccatggagttcatcctc
gacaaaattcgcgcaaccaaaacaaactccgaattttttgacatgatgaaaaaataa
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